Detailed information on CNT30300315


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30177602Triticum aestivumSecale cereale8.5653.790.34290forward
CNT30689346Triticum aestivumTriticum urartu1747.3389.06576forward

Expression of CNT30300315

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MEVLCSERETKLKFHFLVERCACAPGISSTTQSLEVTY*

>peptide 2 (52 aa)
RRPRLPFPRSSHLPPAIPTAVTPTHHRRPRLRHAPLAFLCGSKARRSARGKR*

>peptide 3 (52 aa)
MTVHWLISAQWHVSNIYRDFLYRNNAHGIFICPPAYALFRFVWNMVFWQLGY*

>peptide 4 (78 aa)
PPPPPSFPSLVSSPSRDSHCRHPHPPPPTSSPPCTPRLPLRLQGSALGEGEAVRPRWRTGMGCMFDYFRAAAPSSPRI*

>peptide 5 (53 aa)
MPSNFGRSLFGFDQVTFVTSQQHLQVLSVLEDGRGRKIIFVELNFLYSVLLYV*

>peptide 6 (84 aa)
AAPAFLSLARLISLPRFPLPSPPPTTADLVSAMHPSPSSAAPRLGARRGGSGEAEVEDGDGVHVRLLPCGCAQLASDLGSTERR*

>peptide 7 (47 aa)
MFLIFTGISFIGIMLMVYLYVLQLMLFFDLCGIWCFGSWDIRLHFSM*

>peptide 8 (29 aa)
MIYAVVDLNFLFLGGVGRAAAGQLGEQVL*

>peptide 9 (29 aa)
MVPLPLLLFLILFLSVGQWKSFVRREKPS*

>peptide 10 (31 aa)
MSLLPVGSSIHDCSVTYLFRNRFLGPSYLTM*

>peptide 11 (33 aa)
MVNNMLLICCYILKCCLPFTFAIFTNSSSVWSR*

>peptide 12 (33 aa)
MSKLNTPSYVLFLLILPQIVKMDSFLLTHCTVL*

>peptide 13 (38 aa)
MSSSLCSFSICVEYGVLAAGILDCTSVCDLLMLVLLVK*

Sequence

>CNT30300315
CCGCCGCCCCCGCCTTCCTTTCCCTCGCTCGTCTCATCTCCCTCCCGCGATTCCCACTGCCGTCACCCCCACCCACCACCGCCGACCTCGTCTCCGCCAT
GCACCCCTCGCCTTCCTCTGCGGCTCCAAGGCTCGGCGCTCGGCGAGGGGGAAGCGGTGAGGCCGAGGTGGAGGACGGGGATGGGGTGCATGTTCGACTA
CTTCCGTGCGGCTGCGCCCAGCTCGCCTCGGATCTAGGCTCAACGGAGCGGAGATGAATATCACGATGCTCGTCGTGTTGAGGCCGTCGGCCGGAGGCGC
CGGGGGATCCTCCTCCAGCGGCGGGTAGGGCTCCGAGGCGCTCGTGCTGGCCAACGCCACGGACGTCAGCCACTTCGGCTTCTTCCGGCGCGGCGCCGCA
CGCGAGTTCATCGTCTTCGTCGCCCGCACCGTCGCCCAGCGCACCCAGCCAGGCCAGCGCTAGTCCGTCCAGCACGAAGGTAACCACCCATCTCAGATCT
GCTTGCCGCTACCTGGTTTAGTTTACTTTGTGATACTAGAGCAAGGGCGACATGGGTGATTATGGCGATCTCTGCAAAGTAGCTTGTAGCCCTATCTGGT
AGTTCATGTGATGCGCTGTAGGATTCGCAGTTGCAAAGTGATCTTGTTGCTGAAGTAGCGCTGTAGGCTTGTGCTTCTGTCCATAATGATTCCCTCTGTT
CGAGGGTGTCCCGGCTGCAGAGGTGGTAAGTGGGGTGCCTCCCTCTGTTCACAGTTCACATAGTACTACTTTGGGTTGCATTCAGATGGTTTATTTGTTC
GATTAACTTCAGTGTTTCAGGTTTTAAGTGTCCTATGTGTCTGTCTCCAAATTATTTTGTTGCATATACCATGTTCACATAGTTTTATTATCTGAACTTT
TTGGACGAATCATAGAAGAATTTTGAAATCCCTATTACAACAAATACTGAAATATTAGTACTGCTCCTAGATGTTTCTCGAAAATTAATGATATTCGTTT
GACTTTTACTAGGCTATACAGCCAAGTATATGCACACTATGGCAATATGCAGCCTTGAGATAAACATAAATATTTTCCAAGGGTGTATTAACATGTGCCG
CTAACTTCAAATTAAAAGGATTTGGGTGGATCATTTAAAATGCATAACACTTTTCAACTGCAGTGATTAATCTGCACTTATGGTGCCGTTACCTCTTTTG
TTATTTCTGATACTCTTCTTGTCTGTAGGACAATGGAAGTCCTTTGTTCGGAGAGAGAAACCAAGTTGAAGTTCCACTTCTTGGTGGAGCGATGTGCATG
TGCACCTGGCATTTCTTCTACAACTCAGTCTCTCGAGGTAACATATTGACCTGAAGGCAAAGCTACACCACAGGACTGAACCATACCGTACGCCGGGCGT
GGTCGTGCTACTAACCGCCAGGCCACCGACGCTGGCGCCGGTGCCGACCCCGACCAGAGATCCGTCGCCGCCCAGGACCCCAAGCTACTGGACGACTTCG
CAGACACCGAAGCCAACACCAAAGTTTAATTACCACCTCCAAATCAAATCCTGGGGCTTCATTCATGGCTGTCTAGTACTGCTAGTTAATCCTGGGGCTT
ATTTACCATCAGTTAGTACACTATCCAGTACTGCTAGTTCTCATCTCACTTGTTGTGCTTCTTGGACTGGGAGCACTCTTTGTTATCCAAGATCTAACAT
GAAAGGTAAAATGGGTACATCGCTTGTCTTGTTGTATTTGCAAGTTTGAAACTGGATTAGCATCTTGGAGTATTGTTGTACTCCAACAGACTAAACAGTA
CGTACTCCAGTGCTGATAGTTAGAGTAGCATCTTGGAGTAGGGTAGTCCACATTTGTCTAAATTAGACCGGATTATTCAGATTAGTCCACATTTTATATT
ATTCTTGGAGTACTGTACTGTAGCAGCAGCATGAGTAAACTGAATACTCCTTCATATGTTTTGTTCCTCCTTATTCTTCCTCAGATTGTGAAAATGGATT
CATTCCTTCTTACGCACTGCACTGTACTGTAATATTGGTTGCTTTTGATGAGTGCCAGAGAGCAATAATAGATCATTTTTCGAATTAATACTCCAAAATT
TATCTGTATTGGAGGAGTGATTGTTTCCAAATCAATACTACTGGGCATCATTCATGGCTGTCTAGTAGTCAACATACTTCTGGTTCCATTTAGTATATGC
AGGTAGCAGCAGCTTAAGTGTAATGGACCTGTTGTTACTCTATGCCTACGTTGTTAGAGTTTGCATCATCTCCTTGTTGTTTATAGCATAATTGCCTTCA
CTATTCTTGCTCTGAACCTTTGATCATGATACTGACTGTATTTGTCTTGATGGAATTACAGGCAACATGGTGACTCTAGTGTAGGCAACACTGGCCATCC
TCTTCGAGGCTGTGTGTTTAGGTGATTCCTCGGGTAGCCATGACAGTACACTGGCTGATTAGTGCCCAGTGGCATGTTTCTAATATTTACAGGGATTTCC
TTTATAGGAATAATGCTCATGGTATATTTATATGTCCTCCAGCTTATGCTCTTTTTCGATTTGTGTGGAATATGGTGTTTTGGCAGCTGGGATATTAGAT
TGCACTTCAGTATGTGATTTACTCATGTTGGTACTACTTGTGAAGTGATTATCTTTATGTCCTTGCTACCAGTAGGATCGTCAATACATGATTGCTCTGT
AACTTATCTTTTTCGCAACCGTTTCCTTGGTCCTTCATATCTGACTATGTAATGTAGAAGCTCTACTTTATCCTAATAGCTTCCTGTAGCATTGTGCTAC
TGTCTGTGTGATGGTAAACAATATGCTCTTAATCTGTTGCTATATTCTCAAGTGTTGTTTACCATTTACATTTGCTATATTCACAAATAGTAGTAGTGTC
TGGTCCAGATAAGCAAACAAGGGATGATTTATGCAGTTGTTGATCTGAATTTTTTGTTTCTGGGTGGTGTAGGACGAGCTGCAGCGGGACAACTTGGAGA
GCAAGTACTTTGAGGACAAGATCAAGGAGAACCAAGAGAAGATCACCGGTTACCTCATACTTCTCGGCATGCCTAGCAACTTTGGCAGATCCCTCTTTGG
CTTCGACCAAGTTACATTTGTCACTAGCCAGCAGCATTTACAGGTGTTGTCAGTTCTGGAAGATGGAAGAGGAAGAAAAATAATTTTTGTTGAACTAAAT
TTTCTGTATTCTGTTTTGTTGTATGTATGATTTGATAGTTTTGTATAGGAACAAGTGATACTATTTTGTAGGGCTTTATGGCCTGTGTACTATTTTGTAG
GGCTTTATGGCCTGTGATGTAAACATATTTAGTGCTGAATTATGAATTTTTTGAAAAAATTATTAGAAAGGAGAATCATTTGTATGAA