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Detailed information on CNT30689058


BLAST search results

BLAST vs Swiss-Prot:
sp|P27572|NU4M_WHEAT, E-value = 2e-89

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201077Triticum urartuPisum sativum42.9112.8290.62224reverse complement
CNT3087111Triticum urartuVigna radiata70.597.193.21368forward
CNT30233290Triticum urartuBrassica oleracea47.8912.2594.4250forward
CNT30252713Triticum urartuAvena sativa43.128.5594.67225reverse complement

Expression of CNT30689058

Peptides detected in this lncRNA

>peptide 1 (72 aa)
RSPLQQEKVEIWKLLCNLDRRIYRGNRVLNFQKPHDYIAKGNTPRLKSSQAQLMWLLSYFFGKLLLRLEIPR*

Sequence

>CNT30689058
GACGGTCGCCCCTCCAACAAGAAAAGGTAGAAATATGGAAACTTCTCTGCAATTTAGATCGGAGAATTTATAGAGGAAATCGGGTTTTAAATTTCCAGAA
ACCACACGATTATATAGCCAAAGGGAATACGCCGCGCCTAAAATCATCCCAAGCGCAGCTAATGTGGCTACTAAGCTATTTCTTTGGAAAGCTCCTACTA
AGATTAGAAATTCCCCGATAAAGCTGCTAGTGCCGGGTAAACTCATATTGGCTAAAGTGAAAAAGAAGAAAATGGTAGAGAAATTCGGCATGGTGCTCAC
TAAACCTCCATAATATCTAACAAGTCGAGTCTTATGTCGGTCATATAGAACACCAACACATAGAAAAAGGGCTGAAGAAACCAGTCCATGACTTAACATA
AGTAAAATGCTACCTCCAATTCCCTGTATGTTCGATAGAGCCTAATATTCCCCCAGAGTACGCCGCTTACCCCCCGAACCGTACAAGATAGTTACCACCT
ATCATACGGCTTTCTAACTCCA