Detailed information on CNT30201077


BLAST search results

BLAST vs Swiss-Prot:
sp|Q04050|NU4M_BRACM, E-value = 7e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533611Pisum sativumEucalyptus grandis7.5639.6491.67132reverse complement
CNT30501326Pisum sativumCoffea canephora103.2117.0687.521803reverse complement
CNT3087111Pisum sativumVigna radiata8.1937.7399.3143reverse complement
CNT30233290Pisum sativumBrassica oleracea32.8628.1490.59574reverse complement
CNT30252713Pisum sativumAvena sativa16.1435.7985.82282forward
CNT30689058Pisum sativumTriticum urartu12.8242.9190.62224reverse complement
CNT30104567Pisum sativumOryza rufipogon4.1228.9293.0672reverse complement

Expression of CNT30201077

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MEGGGRLGLGLPIPIGPHKGTGAVERFHIAEPKGSTSVRDRSMSSRPRCIEKYLCTISGSLIRKIELGWGSTM*

>peptide 2 (30 aa)
MLSHGLVPSALFLCVGVLYDRHKTRLVRYYG

>peptide 3 (62 aa)
LLNKNTTVATYFDSKQKKGEGFGNKQTAFYHSCKGSLLKLSTKGCFRLVKKGAVHYKLSALS*

>peptide 4 (63 aa)
MYLHDSCGFYPIYTRSQSPIGPATTPQNGSSCGFISGVTAVEHKKRLRSRNIRAGGTVNSAKI*

>peptide 5 (34 aa)
MTPADFTLSTPGANLLSVLPPRRRTGARVDLFLA*

>peptide 6 (69 aa)
MHYFRFTDKEDRVGVGVYDVILKYDPGRYMLTMGRKQEPLCKKFRGVTDQISYTTIDRQSGTTRNKKLS*

>peptide 7 (56 aa)
MNGILSRGPARLPIKEAESKRKLEELPFIRFAGAAQHIAGSQRAHTTCLTPRSEGP*

Sequence

>CNT30201077
CCTACTAAACAAAAATACAACAGTCGCGACCTACTTTGATTCAAAACAAAAGAAAGGCGAAGGGTTTGGCAACAAGCAAACGGCTTTCTATCATAGTTGC
AAGGGTTCCCTACTTAAGTTAAGTACCAAAGGCTGCTTTCGGTTGGTAAAGAAGGGGGCTGTTCACTACAAGCTATCAGCGCTGTCTTAGATTGAACGTC
GACTTATCTTATTGCCGTTCAATCTCTAAGGCGGGTTTACGCTGAGAACGGAATAGTGTTCGTGTCGGTGAACAACGAACGCCCTAGCTTCTAGAGTTCG
CTGCTTTTCCCAGGCCAGAGAAGGGCTTATACTGCTCGCCTTTGTTTGATATGTTCATTCAGTACCAATACAAACTAAAACTACACCAAAGTGGAAAGGC
CCCTATAGAAGCTAGAAGTAACCTCTAGTAGTCTAGTAGTCGGCCTAACCAAAGCGTCACGACAACAGAAAATTACCCTTATGAATGGAATCTTAAGTAG
GGGGCCCGCCCGCCTACCAATCAAAGAGGCTGAGAGTAAGCGTAAGCTCGAAGAGCTTCCCTTCATTCGCTTCGCGGGAGCCGCACAACACATAGCTGGA
AGTCAGAGGGCCCATACTACCTGCCTAACCCCTCGCTCCGAGGGACCGTAGATAGGAAAAGACGTTATAAACCAAACCACCCCATTCATCTAAAAGAGAG
GGGAAGGGGCCTATGTATTTGCATGACTCCTGCGGATTTTACCCTATCTACACCCGGAGCCAATCTCCTATCGGTCCTGCCACCACGCCGCAGAACGGGA
GCTCGTGTGGATTTATTTCTGGCGTAACAGCGGTGGAACATAAAAAAAGATTACGGTCGCGTAACATAAGGGCCGGAGGTACGGTAAACTCGGCCAAAAT
TTGACACCCGAAGGGAGGGCCCGGCGCGCGCAATCCTATCCTCGTCCGAGTTTACCCCTTGCACTTCGGACAGCCGTCCGTAGCATCATAAGGAGGACCT
CCCGGGTAAAAAAAATGGTACGGTACATAGGAGGCTGGTCTTTCTCAACGTGGTGTATAGCACGAAAAACCTTTCGATACAAGATAGGGCCATTCACATG
AAAGAAGATAAAAAACCCTTTCTTCTCTTTCTCGAGGGGGAAAGATAAAGAGGGTCTTATGGAGGGAGGGGGAAGGCTTGGGCTGGGCCTACCTATCCCG
ATAGGACCTCATAAAGGAACGGGGGCTGTTGAGAGGTTCCATATTGCCGAGCCGAAGGGCAGCACTTCTGTACGTGATCGTAGTATGTCATCTCGTCCCC
GCTGCATTGAAAAGTACCTATGCACTATTTCCGGTTCACTGATAAGGAAGATAGAGTTGGGGTGGGGGTCTACGATGTGATACTCAAGTATGACCCGGGG
AGATACATGCTAACTATGGGTAGAAAGCAGGAACCCTTATGTAAAAAATTTCGGGGGGTTACAGATCAGATCTCTTATACTACCATCGATCGACAGAGCG
GAACGACCAGAAATAAAAAGTTAAGTTAGAAAGCCGTATGATAGGCGGTAACTATCTTGTACGGTTCGGGGGGTAATCGGCGTACTCCGATCAGTGGGGG
GGGAATCTTTGGCTCTATCGAACATACAGGGAATTGGAGGTAGCATTCCACCGATGTTAAGTCATGGACTGGTTCCTTCAGCCCTTTTTCTATGTGTTGG
TGTTCTATATGACCGACATAAGACTCGACTTGTTAGATATTACGGAG