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Detailed information on CNT30687891


BLAST search results

BLAST vs Swiss-Prot:
sp|P12331|CB22_ORYSJ, E-value = 6e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30307765Triticum urartuTriticum aestivum59.3756.1696.26374forward
CNT30226790Triticum urartuHordeum vulgare40.1658.2989.72253forward
CNT30668490Triticum urartuTriticum dicoccoides76.3571.2695.63481forward

Expression of CNT30687891

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQRQWITSSSRFLAKVSGSAERPAVSHP*

>peptide 2 (39 aa)
MVTRPPPSAYEAPASLIAGEESAIVVEAAIAAGWNRASC*

>peptide 3 (61 aa)
TSLIVYNINDQILIIHPEHTYTPEKSIFMCLLAGHKVGGEGPRVVVDGVGEVLGKRLWVVS*

Sequence

>CNT30687891
AAACATCTTTGATAGTGTACAACATCAACGATCAGATATTAATCATACATCCAGAGCACACATATACTCCTGAGAAGTCGATTTTCATGTGTTTACTTGC
CGGGCACAAAGTTGGTGGCGAAGGCCCACGCGTTGTTGTTGACGGGGTCGGCGAGGTGCTCGGCAAACGCCTCTGGGTCGTCAGCTAGGCCAAGGGGGTC
GAAGCTGCCACCGGGGTAGAGTGGGTCGACGATCTCTCCGAGCGGGCCACCAGCAACGCGCATGGCCCAGCGGCAGTGGATCACCTCGAGCTCGCGGTTC
TTGGCGAAGGTCTCCGGGTCGGCGGAGAGGCCCGCGGTGTCCCACCCGTAGTCGCCCGGGAACTCGCCGCTGAGGTAGCTCGGGGGCTCGCCAGAGAGCG
GGCCGAGGTAGAGCACACGGTCGGGGCCGTACCAGGGGCTGTTGGAGGCGGCGGCCTTGGGCGTGGCCTTGCGCATGGTGACGCGGCCGCCGCCGAGCGC
GTACGAGGCTCCGGCGAGCTTGATCGCGGGGGAGGAGAGCGCCATTGTGGTGGAGGCCGCCATTGCTGCCGGATGGAACAGAGCAAGCTGCTGATGTGCG
GCTGCCGCTGCTACTGATGGGTGGCTGCGT