« Back to Triticum dicoccoides search


Detailed information on CNT30668490


BLAST search results

BLAST vs Swiss-Prot:
sp|P07370|CB2B_SOLLC, E-value = 5e-87

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30226790Triticum dicoccoidesHordeum vulgare37.4858.2990.51253forward
CNT30251958Triticum dicoccoidesAvena sativa70.3756.7589.68475forward
CNT30687891Triticum dicoccoidesTriticum urartu71.2676.3595.63481forward

Expression of CNT30668490

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQRQWITSSSRFLAKVSGSAERPAVSHP*

>peptide 2 (69 aa)
MCLLAGHKVGGEGPRVVVDGVGEVVSEVLKRTLTGDDGLHKVSKHGEHCKAAVLDLLHLELGKRLWIVS*

>peptide 3 (39 aa)
MVTRPPPSAYEAPASLIAGEESAIVVEAAIAAGWNRASC*

>peptide 4 (80 aa)
SCVYLPGTKLVAKAHALLLTGSARWSARFSSGPLPVTMACTKYPNMENIARRPFLISFTLSSANASGSSARPRGSKLPPG*

Sequence

>CNT30668490
TCATGTGTTTACTTGCCGGGCACAAAGTTGGTGGCGAAGGCCCACGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCAGCGAGGTTCTCAAGCGGACCCT
TACCGGTGACGATGGCCTGCACAAAGTATCCAAACATGGAGAACATTGCAAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCGGCAAACGCCTCTGG
ATCGTCAGCTAGGCCAAGGGGGTCGAAGCTGCCACCGGGGTAGAGTGGGTCGACGATCTCTCCGAGCGGGCCACCAGCAACGCGGTAGTCGAGCGCGCCG
AGCATGGCCCAGCGGCAGTGGATCACCTCGAGCTCGCGGTTCTTGGCGAAGGTCTCCGGGTCGGCGGAGAGGCCCGCGGTGTCCCACCCGTAGTCGCCCG
GGAACTCGCCGCTGAGGTAGCTCGGGGGCTCGCCAGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGGGCCGTACCAGGGGCTGTTGGAGGCGGCGGCCTT
GGGCGCGGCCTTGCGCATGGTGACGCGGCCGCCGCCGAGCGCGTACGAGGCTCCGGCGAGCTTGATCGCGGGGGAGGAGAGCGCCATTGTGGTGGAGGCC
GCCATTGCTGCCGGATGGAACAGAGCAAGCTGCTGATGTGCGGCTGCCGCTGCTACTGATGGCTGCGTGAGGAAG