Detailed information on CNT30226790


BLAST search results

BLAST vs Swiss-Prot:
sp|P09755|CB22_SOYBN, E-value = 1e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30192020Hordeum vulgareSecale cereale56.4527.9792.65245forward
CNT30668490Hordeum vulgareTriticum dicoccoides58.2937.4890.51253forward
CNT30687891Hordeum vulgareTriticum urartu58.2940.1689.72253forward

Expression of CNT30226790

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MVMRPPPRTYEAPASFIAGEESAMVVAAIACCRMEQSKLLMCGCCCD*

>peptide 2 (33 aa)
MRTRFSSVYLPGTKLVAKAHALLLTGSARWSAR*

>peptide 3 (30 aa)
PYGPSIVNIFDSVQHQRSDISHTSRVHTYS*

Sequence

>CNT30226790
CCATATGGGCCCTCAATTGTAAACATCTTTGATAGTGTACAACATCAACGATCCGATATTAGTCATACATCCAGAGTACACACATACTCATGAGAACTCG
ATTTTCAAGTGTTTACTTGCCGGGCACGAAGTTGGTGGCGAAGGCCCACGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCAGCGAGGTAGCTCGGGGGC
TCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGGGCCATACCACGGGCTGCTGGAGGTGGCAGCCTTGGCCGCGGTCTTGCGCATGGTGATGCGGC
CGCCGCCGAGGACGTACGAGGCTCCGGCGAGCTTCATCGCGGGGGAGGAGAGCGCCATGGTCGTCGCCGCCATTGCTTGCTGCCGGATGGAACAGAGCAA
GCTGCTGATGTGCGGCTGCTGCTGCGACTGATGG