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Detailed information on CNT30307765


BLAST search results

BLAST vs Swiss-Prot:
sp|P07370|CB2B_SOLLC, E-value = 1e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30227084Triticum aestivumHordeum vulgare51.6566.4190.12344forward
CNT30442733Triticum aestivumAegilops tauschii68.3278.4597.36455forward
CNT30669183Triticum aestivumTriticum dicoccoides60.2143.7397.01401forward
CNT30687891Triticum aestivumTriticum urartu56.1659.3796.26374forward

Expression of CNT30307765

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQRQWITSSSRFLAKVSGSAERPAVSHP*

>peptide 2 (72 aa)
MCLLAGHKVGGEGPRVVVDRVGERAARGRRSRARRAWPSGSGLPRARGSWRRSPGRRRGPRCPTRSRPGTRR*

Sequence

>CNT30307765
CCCGAACAATTAATGTCCACTCGTATTCATATGGAAAATGAAAACCATGCATTTCTCATATAGACATTTCATGTTCCAGACGGGCCCTATTTGTAAACAT
CTTTGATAGTGTACAACATCAACGATCAGATATTAATCATACATCCAGAGTACACATATACTCCTGAGAAGTCGATTTTCATGTGTTTACTTGCCGGGCA
CAAAGTTGGTGGCGAAGGCCCACGCGTTGTTGTTGACAGGGTCGGCGAGCGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGC
AGTGGATTACCTCGAGCTCGCGGTTCTTGGCGAAGGTCTCCGGGTCGGCGGAGAGGCCCGCGGTGTCCCACCCGTAGTCGCCCGGGAACTCGCCGCTGAG
GTAGCTCGGGGGCTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGGGCCGTACCACGGGCTGTTGGAGGCGGAGGCCTTGGGCGCGGCCTTGCGC
ATGGTGATGCGGCCGCCGCCGCCGAGGGCGTAGGAGGCTCCGGCGAGCTTGATCGCGGGGGAGGAGAGCGCCATGGTGGTGGTGGCCGCCATTGCTGCCG
GATGGAACAGAGCAAGCTGCTGATGTGCGGCTGCCGCTGCTACTGATGGGTGGCTGCGTGAGGAAG