CANTATAdb - search

Detailed information on CNT30687059

BLAST search results

BLAST vs Swiss-Prot:
sp|P21569|CYPH_MAIZE, E-value = 6e-67

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30691021	Triticum urartu	Oryza sativa	24.68	50.74	87.21	172	forward
CNT30671343	Triticum urartu	Setaria viridis	33.72	40.87	89.36	235	forward
CNT30640933	Triticum urartu	Nymphaea colorata	31.42	28.7	80.82	219	forward
CNT30710775	Triticum urartu	Glycine max	31.99	39.68	82.51	223	forward
CNT30194493	Triticum urartu	Secale cereale	31.85	32.27	99.1	222	forward

Expression of CNT30687059

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MFLTTSMPSTTSPKTTCLPSSQLQGTVQMKNWEPLVLGPALAMERIPGLVCLWTNFSSANFSP*

>peptide 2 (54 aa)
MDSPPVPARKFSTVRGTASLYSSITMRPAGAPPTVMSKNTLGLAISLAGIGDEG*

Sequence

>CNT30687059
TAATTCATAGCGGAGTTCATCTCATTCAAACGGTAAGATAGCAGCAGACACAGGAAGATAACCAAGGCCGCCGGACGCAGATCCAGCGGCCCAAAGAGTC
CACCTAAAACCCTCCTAAACCAACCACGGAGATCTCATCGGACGGACCAGGGGAAGACACGACACACGACACACGACTCTCTTATTTAGATCGACGACAC
GACACGGGACACACGGGGCGACCGGCGGGCGGCCGGATCTAGAGCTGGCCGCAGTCGGCGATAACGACCTGCTTGGAGCAGGTGCCGCTGCGGGAGCCCA
CCTTCTCGATGTTCTTGACGACGTCCATGCCCTCGACGACCTCGCCGAAGACCACGTGCTTGCCGTCGAGCCAATTGCAGGGGACGGTGCAGATGAAGAA
CTGGGAGCCGTTGGTGTTGGGCCCGGCGTTGGCCATGGAGAGGATCCCGGGCTTGGTGTGCTTGTGGACGAACTTCTCGTCGGCGAACTTCTCGCCGTAG
ATGGACTCGCCGCCGGTGCCCGCGCGGAAGTTCTCCACCGTCCGCGGCACCGCGTCCTTGTACAGCTCCATCACGATGCGCCCCGCCGGCGCGCCGCCGA
CGGTCATGTCGAAGAACACCCTCGGGTTGGCCATCTCTCTCGCCGGGATCGGGGATGAGGGCTAGGGTTTTGAGATGGGGATTTCTGTGCGGATTGG