Detailed information on CNT30685079


BLAST search results

BLAST vs Swiss-Prot:
sp|P14279|CB25_SOLLC, E-value = 4e-64

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521908Triticum urartuSetaria italica41.8142.8990.86383forward
CNT30664645Triticum urartuTriticum dicoccoides98.6999.8999.89904forward
CNT30579435Triticum urartuEchinochloa crusgalli41.8138.0792.69383forward
CNT30498755Triticum urartuDigitaria exilis2540.1189.96229forward

Expression of CNT30685079

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MACTKKPNMENMARRPFLSSFTLSSAAVSGSSARPSGSKAPPG*

>peptide 2 (45 aa)
MKPMSTTCTAQMARMLCACTRLGLPRYLGRSGPYLHIHSFISKVH*

>peptide 3 (71 aa)
MTHDSSIHSLVHTLCLINLHCAQLARGPLARSIMVQINTQSTCSYTLIHDVQVHMHISSDGRTDGRTAKHI*

>peptide 4 (73 aa)
MGNISSTYQMLWGALLTVRRMVMRPPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACELSEMNWWMVC

Sequence

>CNT30685079
CAGTTGATGATCTTGAGTAATGACACACGATTCTTCCATCCATTCCCTCGTGCACACCTTGTGCTTAATTAATTTACATTGCGCGCAGCTAGCGAGAGGA
CCTCTCGCTCGCTCGATCATGGTACAAATAAACACACAAAGTACGTGCAGCTACACGTTGATCCACGACGTACAAGTACACATGCATATCTCGTCCGATG
GACGGACGGACGGACGGACGGCTAAACACATTTAGCTTCCGGGGGCGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACCGGGTCGGCGACGTGGTC
GAAGAGGTTCTCAACTGGCCCCTTCCCGGTGACGATGGCCTGCACGAAGAAACCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGAGCTCCTTCACC
TTGAGCTCGGCGGCGGTGTCGGGGTCGTCGGCGAGGCCAAGTGGGTCGAAGGCGCCGCCCGGGTAGATGATGTCGAGGCCCTCGCCGAGGGGCCCGCCAC
CAACACGGTAGCCCTCGATGAAGCCCATGAGCACCACCTGCACCGCCCAGATGGCGAGGATGCTCTGCGCGTGCACCAGGTTGGGGTTGCCCAGGTACTT
GGGACGGTCAGGGCCGTACCTACACATCCATTCATTCATCAGCAAGGTGCATTAGTCCAATGGTGTATCTTCATCAGGGGGAGCGAACCATGCATGGGAA
ATATTAGTAGTACGTACCAGATGCTCTGGGGCGCGCTCTTGACGGTCCGGCGCATGGTGATGCGGCCGCCAAAGTCGCCGACGCTGCGGACGAGGTCATC
GCGCCGCGGGGCGGTGCCGAGGAAGCTGGTCGTCTGGTGCAGCGCCGACGCGGCCATTTCGCTGGTGGCTGGGGCTGCCTGCGAGCTCAGTGAGATGAAC
TGGTGGATGGTGTGTG