Detailed information on CNT30664645


BLAST search results

BLAST vs Swiss-Prot:
sp|P14279|CB25_SOLLC, E-value = 4e-64

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521908Triticum dicoccoidesSetaria italica42.3242.8990.86383forward
CNT30685079Triticum dicoccoidesTriticum urartu99.8998.6999.89904forward
CNT30579435Triticum dicoccoidesEchinochloa crusgalli42.3238.0792.95383forward

Expression of CNT30664645

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MTHDSSIHSLVHTLCLINLHCAQLARGPLARSIMVQINTQSTCSYTLIHDVQVHMHISSDGRTDGRTAKHI*

>peptide 2 (45 aa)
MKPMSTTCTAQMARMLCACTRLGLPRYLGRSGPYLHIHSFISKVH*

>peptide 3 (73 aa)
MGNISSTYQMLWGALLTVRRMVMRPPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACELSEMNWWMVC

>peptide 4 (43 aa)
MACTKKPNMENMARRPFLSSFTLSSAAVSGSSARPSGSKAPPG*

Sequence

>CNT30664645
TTGAGTAATGACACACGATTCTTCCATCCATTCCCTCGTGCACACCTTGTGCTTAATTAATTTACATTGCGCGCAGCTAGCGAGAGGACCTCTCGCTCGC
TCGATCATGGTACAAATAAACACACAAAGTACGTGCAGCTACACGTTGATCCACGACGTACAAGTACACATGCATATCTCGTCCGATGGACGGACGGACG
GACGGACGGCTAAACACATTTAGCTTCCGGGGGCGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACCGGGTCGGCGACGTGGTCGAAGAGGTTCTC
AACTGGCCCCTTCCCGGTGACGATGGCCTGCACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGAGCTCCTTCACCTTGAGCTCGGCG
GCGGTGTCGGGGTCGTCGGCGAGGCCAAGTGGGTCGAAGGCGCCGCCCGGGTAGATGATGTCGAGGCCCTCGCCGAGGGGCCCGCCACCAACACGGTAGC
CCTCGATGAAGCCCATGAGCACCACCTGCACCGCCCAGATGGCGAGGATGCTCTGCGCGTGCACCAGGTTGGGGTTGCCCAGGTACTTGGGACGGTCAGG
GCCGTACCTACACATCCATTCATTCATCAGCAAGGTGCATTAGTCCAATGGTGTATCTTCATCAGGGGGAGCGAACCATGCATGGGAAATATTAGTAGTA
CGTACCAGATGCTCTGGGGCGCGCTCTTGACGGTCCGGCGCATGGTGATGCGGCCGCCAAAGTCGCCGACGCTGCGGACGAGGTCATCGCGCCGCGGGGC
GGTGCCGAGGAAGCTGGTCGTCTGGTGCAGCGCCGACGCGGCCATTTCGCTGGTGGCTGGGGCTGCCTGCGAGCTCAGTGAGATGAACTGGTGGATGGTG
TGTGT