Detailed information on CNT30579435


BLAST search results

BLAST vs Swiss-Prot:
sp|P14279|CB25_SOLLC, E-value = 8e-78

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30664645Echinochloa crusgalliTriticum dicoccoides38.0742.3292.95383forward
CNT30685079Echinochloa crusgalliTriticum urartu38.0741.8192.69383forward

Expression of CNT30579435

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MARARSPERSLTCRGRSWWRRPMRCWRPGPRRGRRGSRWAPSR*

>peptide 2 (41 aa)
SGSGNPSRYLRKKQCRLIKRCFTHECYTYTIDSSADISIRA*

>peptide 3 (33 aa)
MYRQRQLLMWSLVSTEHTPARAKLLHAYCNKAE*

>peptide 4 (30 aa)
GIRKSVTLLKKETMSIDQTMFHSRMLHVHH*

>peptide 5 (65 aa)
MLWGALLTVRRMVMRPPASAPETGRETRACPRKLVVWWSADAAIFSISGGELSTTCSGIGERSIEW

>peptide 6 (61 aa)
MSTTWQAQMARMLCACTRLGLPRYLGRSGPYLHAIDEHIYIFIYISSLVDNDGIDMNTANI*

>peptide 7 (50 aa)
MGPFPVTMACTKKPNMENMARRPFLSSLTLSSAAVSGSSARPSGSKAPPG*

>peptide 8 (46 aa)
MEHDVPDALGSALDGAAHGDAAAGIGAGDGAGDQGLPEEAGGLVER*

Sequence

>CNT30579435
TCGGGATCCGGAAATCCGTCACGCTACTTAAGAAAGAAACAATGTCGATTGATCAAACGATGTTTCACTCACGAATGTTACACGTACACCATTGATTCAT
CAGCTGACATAAGCATCCGTGCCTAGTTTACAATCTCACACCACATGTACAGGCAGAGGCAGCTGCTGATGTGGTCACTGGTCAGCACAGAGCATACGCC
GGCGCGTGCAAAACTACTACACGCCTACTGCAACAAAGCAGAGTAGAGTACACAGGGCCACAGGGGCATGGCTCGAGCTCGATCGCCGGAGCGCTCGCTC
ACTTGCCGGGGACGAAGTTGGTGGCGTAGGCCCATGCGTTGTTGGCGACCGGGTCCGCGACGTGGTCGAAGAGGTTCTCGATGGGCCCCTTCCCGGTGAC
GATGGCCTGCACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGAGCTCCTTGACCTTGAGCTCGGCGGCGGTGTCCGGGTCGTCGGCG
AGGCCCAGCGGGTCGAAGGCGCCGCCGGGGTAGACCTTGTCGAGGCCCTCGCCGAGCGGCCCGCCGCCGACGCGGTAGCCCTCGACGAAGCCCATGAGCA
CGACCTGGCAGGCCCAGATGGCGAGGATGCTCTGCGCGTGCACCAGGTTGGGGTTGCCCAGGTACTTGGGACGGTCAGGGCCGTACCTGCACGCGATCGA
TGAACATATATATATATTTATATATATATCATCTCTTGTCGATAATGATGGAATTGACATGAACACAGCTAATATATAAGAATGACATATGGAGCACGAC
GTACCAGATGCTCTGGGGAGCGCTCTTGACGGTGCGGCGCATGGTGATGCGGCCGCCGGCATCGGCGCCGGAGACGGGGCGGGAGACCAGGGCCTGCCCG
AGGAAGCTGGTGGTCTGGTGGAGCGCTGACGCGGCCATCTTCTCGATCTCCGGCGGTGAGCTGAGCACGACGTGTAGTGGGATTGGTGAGCGATCGATCG
AGTGGT