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Detailed information on CNT30681897


BLAST search results

BLAST vs Swiss-Prot:
sp|P05698|RBL_HORVU, E-value = 0.0

BLAST vs NONCODE:
NONMEST005601, E-value = 3e-151

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678101Triticum urartuSetaria viridis24.6365.9193.53232forward
CNT30225846Triticum urartuHordeum vulgare28.6623.8196.3270forward
CNT30323704Triticum urartuAsparagus officinalis31.2198.9991.5294forward

Expression of CNT30681897

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDKLHNRSIGCLPQQQARCDSIVLCNDQDW*

>peptide 2 (33 aa)
INQQNLKSFRVPLLTYLLLYRSGYDLPQTYAML*

Sequence

>CNT30681897
CAATAAATCAACAAAACCTAAAGTCATTTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCGGAGTGGATATGATCTCCCCCAGACATACGCAATGCT
TTAGCTAATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCACGGTGAATGTGAAGAAGTAGGCCATTGTCGCGGCAAT
AATGAGCCAAAGTAGTATTTGCGTAATGCCCCTTGATTTCACCGGTTTCGGCCTGTGATTTATAAATAGCTTCGGCACAAAAGACAAAACGGTCTCTCCA
GCGCATAAATGGTTGTGAGTTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCACCACGTAGACACTCATAACACGCTCTACCATAATTTTTTGCGGAT
AATCCCAATTTTGGACGACCGTACTTGTTCAACTTATCTCTTTCAACTTGGATACCATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTC
GTAGATCCTCCAAACGTAGAGCACGTAGGGCTTTGAAACCAAATACGTTACCTACAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTC
TAATGGATAAGCTACATAACAGATCCATTGGTTGTCTTCCCCAGCAACAGGCTCGATGTGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAAGTCCA
TCAGTCCAAACAGTTGTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCCCCTGCTTCTTCGGGCGGAACCCCAGGCTGAGGACTTACTCGGAATG
CTGCCAAGATATCAGTATCCTTAGTTTCATACTCTGGGGTGTAGTAAGTCAATTTATAATCTTTAACACCAGCTTGAAATCCAACACCTGCTTTAGTTTC
TGTTTGTGGTGACATAAGTCCCTCCCTATAACTCTTGAATTA