Detailed information on CNT30681463


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 4e-49

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-49

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30287289Triticum urartuTriticum aestivum10094.6898.65445forward
CNT30386018Triticum urartuTriticum turgidum10098.6799.78445forward
CNT30252634Triticum urartuAvena sativa52.5845.9795.3234forward

Expression of CNT30681463

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTKIC

>peptide 2 (37 aa)
TSNSSTRFTRKFTYSLLRCYCTSNFVNQTRNSDSIVH*

>peptide 3 (96 aa)
MKRTQRTTKHKPAGPTPGQLLTTTEAEHKVEGGLLLNVVVRKGAAILQLLAGEDQALLVRGNALLVLDLGLDVVDGVGALNLEGDGLAGEGLHKDLH

Sequence

>CNT30681463
AAACAAGCAACTCAAGCACAAGATTTACCCGAAAGTTCACTTATTCATTACTTAGATGTTACTGTACCAGCAACTTCGTAAACCAAACACGTAACAGTGA
CTCGATAGTTCATTAAACCAACATAGGACTGATGCGAACAATGAAACAGTTCAAATGAAACGGACACAACGAACGACCAAGCATAAACCAGCAGGTCCAA
CGCCAGGGCAATTACTGACCACCACGGAGGCGGAGCACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCCAGCT
GCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAACCTC
GAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT