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Detailed information on CNT30386018


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 5e-49

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-49

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30681463Triticum turgidumTriticum urartu98.6710099.78445forward

Expression of CNT30386018

Peptides detected in this lncRNA

>peptide 1 (39 aa)
CQTSNSSTRFTRKFIYSLLRCYCTSNFVNQTRNSDSIVH*

>peptide 2 (35 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICI

>peptide 3 (96 aa)
MKRTQRTTKHKPAGPTPGQLLTTTEAEHKVEGGLLLNVVVRKGAAILQLLAGEDQALLVRGNALLVLDLGLDVVDGVGALNLEGDGLAGEGLHKDLH

Sequence

>CNT30386018
TGCCAAACAAGCAACTCAAGCACAAGATTTACCCGAAAGTTCATTTATTCATTACTTAGATGTTACTGTACCAGCAACTTCGTAAACCAAACACGTAACA
GTGACTCGATAGTTCATTAAACCAACATAGGACTGATGCGAACAATGAAACAGTTCAAATGAAACGGACACAACGAACGACCAAGCATAAACCAGCAGGT
CCAACGCCAGGGCAATTACTGACCACCACGGAGGCGGAGCACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCC
AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAA
CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCT