Detailed information on CNT30252634


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 1e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671166Avena sativaSetaria viridis46.5659.194.51237forward
CNT30303670Avena sativaTriticum aestivum46.3744.5396.19236forward
CNT30667751Avena sativaTriticum dicoccoides45.975094.44234forward
CNT30681463Avena sativaTriticum urartu45.9752.5895.3234forward
CNT30495775Avena sativaDigitaria exilis46.1744.1794.47235forward

Expression of CNT30252634

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MPSLSWILALTLSMVSEDSTSRVMVLPVRVFTKICI

Sequence

>CNT30252634
GCAACAGAAACAAAAGAGAAAAACTGCATGAAAACATTCAACCGCAAGATATCAGATGAGACAGTAAATTGAGCACACACATTACTACAAAGTTCACTTA
TTCATAAAGGGACTGCTGTACCAGCAATTGTTTGCACGAAACCAACACAGGATAGGAGGACACGATGGCCCATTAAACCTGACACAGTACTTACGATAGA
CACTTTACTTGGAAGGGCGACAAGGCAGCCCACCGGACGACAAGGCACAGCAGTAGCTCCACCGCCAAGACACTTACTGACCACCACGGAGGCGGAGCAC
CAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGA
ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGA
TCTGCATCT