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Detailed information on CNT30681431


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30179272Triticum urartuSecale cereale36.2833.9994.21242forward
CNT30308729Triticum urartuTriticum aestivum19.9441.4390.98133forward
CNT30393875Triticum urartuTriticum turgidum19.9422.1390.23133forward
CNT30439034Triticum urartuAegilops tauschii19.9426.3490.98133forward

Expression of CNT30681431

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MAPVLAALLSGSFQLAFLALIFPKAPLDQHLGHDPAKSYRLFKIGLQMTHLFYFKHAWVALTRLACIFSTKV

>peptide 2 (37 aa)
FLTAEAPKIKPSDPPSMGARRGRRRSLIFPSATPRPH*

>peptide 3 (76 aa)
FSLRKRLKSNPLTRHQWGLAAADGDLSSFPPPHRVLIKHTRKVAPPRHPADEPLSRPQVRRRPIPSAVPFPRDLIR*

Sequence

>CNT30681431
ATTTCTCACTGCGGAAGCGCCTAAAATCAAACCCTCTGACCCGCCATCAATGGGGGCTCGCCGCGGCCGACGGCGATCTCTCATCTTTCCCTCCGCCACA
CCGCGTCCTCATTAAGCACACGCGCAAGGTCGCGCCCCCTCGGCATCCAGCAGACGAGCCTCTCTCTCGCCCGCAGGTGCGGCGCCGGCCCATTCCTTCC
GCAGTTCCATTCCCACGGGATCTGATCCGGTGACTATTTGCACGCGTCGCCGTCGTCGGGAGCTCGTTCTCGCGGCGCGATTACGATCTTCGGACACCCT
TACCCGAGCTTCTCCGCCCGACAACTTCGTCCTCATTCCTCAGCGAGCGCCCTTGGTGGAGAAAGATTTCTACACAGGGGCAAGGAGCACCTCATCCCCG
ACATCAGTGTGATCTTTAACTGGCAGGTCGGTGTTCTTATCAAAGGGGAATGGCTCCAGTTTTGGCTGCGCTGCTTTCAGGATCATTTCAATTGGCATTT
CTGGCTTTGATCTTTCCAAAGGCGCCACTGGATCAACACTTGGGTCATGACCCTGCAAAGAGTTATAGATTATTTAAAATAGGCTTGCAAATGACACATC
TGTTTTATTTTAAACATGCATGGGTGGCACTAACCAGGTTAGCATGCATTTTCTCAACAAAAGTTTG