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Detailed information on CNT30308729


BLAST search results

BLAST vs Swiss-Prot:
sp|P30271|AMYB_SECCE, E-value = 2e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30393875Triticum aestivumTriticum turgidum100.9353.9195.06324forward
CNT30439045Triticum aestivumAegilops tauschii10050.08100321forward
CNT30681431Triticum aestivumTriticum urartu41.4319.9490.98133forward

Expression of CNT30308729

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MAPVLAALLVGSFQSSVLALIFAKAPLDQHMGHE

Sequence

>CNT30308729
TTCCAGAACACGCACAAGTAATGTGCTTTATTTATTGTTAATAAGGCAGAGAAAGGTTTCTCTGTGACACACAACATAAAAGGTATTGTAGATAGTAAAG
GTTTCACTACACGGTGGGAGGGAGCTCCCCACCCATGCCACCGGTAGGGTCTTCAACCTCCCCACCCATGCCACCAGTGGGGCCTTGAACTGGCAGGTCG
GTGTGCTCTTCAAAGGGGAATGGCTCCAGTTTTGGCTGCGCTGCTTGTAGGATCATTTCAATCGTCAGTTCTGGCCCTGATCTTTGCAAAGGCGCCACTG
GATCAACACATGGGTCATGAG