« Back to Aegilops tauschii search


Detailed information on CNT30439034


BLAST search results

BLAST vs Swiss-Prot:
sp|P30271|AMYB_SECCE, E-value = 1e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30681431Aegilops tauschiiTriticum urartu26.3419.9490.98133forward

Expression of CNT30439034

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MAPVLAALLVGSFQSSVLALIFAKAPLDQHMGHEAEKDQ

Sequence

>CNT30439034
TTGATGAGTAATCCTCATGATGTACCGTAGCACCACATCTTATTTATCCTCATCGGCTTACTTTTAGGGCGCGTCAATTCTCACAAAGAGACGATTAACC
CTTCTCGTAGACTACAACGCTGAGATTTTTCTTCCAGAACACGCACAAGTAATGTGCTTTATTTATTGTTAATAAGGCAGAGAAAGGTTTCTCTGTGACA
CACAACATAAAAGGTATTGTAGATAGTAAAGGTTTCACTACACGGTGGGAGGGAGCTCCCCACCCATGCCACCGGTAGGGTCTTCAACCTCCCCACCCAT
GCCACCAGTGGGGTCTTGTTGAACCTCCCCACCCATGCCACCAGTGGGGCCTTGAACTGGCAGGTCGGTGTGCTCTTCAAAGGGGAATGGCTCCAGTTTT
GGCTGCGCTGCTTGTAGGATCATTTCAATCGTCAGTTCTGGCCCTGATCTTTGCAAAGGCGCCACTGGATCAACACATGGGTCATGAGGCTGAAAAGGAT
CAAAT