Detailed information on CNT30681368


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000224, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30193763Triticum urartuSecale cereale7190.6799.51594forward
CNT30401200Triticum urartuTriticum turgidum88.2497.9297.431981forward
CNT30140791Triticum urartuLolium perenne70.4796.5299.051582forward
CNT3010929Triticum urartuZea mays71.7190.597.21610reverse complement
CNT30719826Triticum urartuTriticum spelta58.0460.3598.471303forward
CNT30369028Triticum urartuSorghum bicolor62.9810098.661414forward

Expression of CNT30681368

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MSSFGPVSAGRSPVVLRPTTGAVSRQLCDF*

>peptide 2 (32 aa)
MGIDHCNCWSSTRMPSKRESSARVDYVPALCTH

>peptide 3 (38 aa)
MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEPSLRS*

>peptide 4 (38 aa)
MADAGRHRGRATWLILPVVICLSQRLSHACASMNQFEL*

>peptide 5 (33 aa)
MPTRDRRMLLIGLRRHLMRNQSLWVPGGVWSQG*

>peptide 6 (36 aa)
MITRRIARPSCRRRIIQISALSTFDGRIGAYHGGDG*

>peptide 7 (90 aa)
MLLMIKGRGPSGCLDPTQSSLNWEQPEQELPLPSPQLRGRIRDSLRRSSRTMSYAAQQRQPARLLLVSFDASGSAGRWPTLGVTEDVLPG*

>peptide 8 (52 aa)
MINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*

>peptide 9 (56 aa)
MLCAGAIKAISLLLLVLDVAHDKGSWPFRLPRPDPKLSELGTTGTGVASTLSTVTW*

Sequence

>CNT30681368
CCACGCGTGATTTGGCCTTGCAGGACGCCTTCGTGCAAGTGATCCTCCCGTGCTTTGCACGGGAGGAGGCTTGGTTGGTTTGACCGCTTGTTGGCTACTA
AGCGCATGAGCAGCTTTGGACCCGTGTCTGCCGGTAGATCCCCCGTTGTACTGCGGCCGACTACCGGCGCCGTGTCCCGTCAATTGTGTGACTTTTAATC
GCTGGATTAAGAGTGCTTGCGTGCTAGTACCCGACCTACGGGAAGTGGTGCTTCGTACAAAATTTACCTCGCGGCGGACGCCCTTTGGGTGTGCTGCTGT
GGCCGAATAGCTCTTGCGGCGTTGCCTCATCGTGCCGGCATGTTATGTGCCGGTGCTATCAAGGCAATCTCGCTCCTGCTATTGGTCTTGGATGTTGCTC
ATGATAAAGGGTCGTGGCCCTTCCGGTTGCCTCGACCCGACCCAAAGCTCTCTGAATTGGGAACAACCGGAACAGGAGTTGCCTCTACCCTCTCCACAGT
TACGTGGTAGGATACGCGACTCTCTGCGCCGATCCTCAAGGACGATGAGCTATGCCGCTCAACAGCGACAACCGGCCCGACTATTGCTTGTGAGTTTCGA
CGCAAGTGGAAGCGCAGGGCGATGGCCGACGCTGGGCGTCACCGAGGACGTGCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAA
GCCATGCATGTGCAAGTATGAACCAATTTGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAAC
CGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCTGCTCGCTGATCCGA
TGATTCATGATAACTCGACGGATCGCACGGCCTTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACC
ATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACC
CAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCATTAGTGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATC
CATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGGG
CCGGGTCGGCCGGTCCGCCTCACGGCGAGCACCGACCTACTCGACCCTTCGGCCGGCATCGCGCTCCTAGCCTTAACTGGCCGGGTCGTGTTTCCGGCAT
CGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTT
CGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAG
CATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGG
ATCGGCGGATGTTGCTTATAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGA
ATTGACGGAAGGGCACCACCAGACATAGCAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGA
GCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGCCATCCCTCCGCAGCTAGCTTCTTAGAGGGACTATCG
CCGTTTAGGCGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTATATA
GCCTTGGCCGACAGGCCCGGGTAATCTTGGGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGAATGCCTAGTAAGCGCGA
GTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCG