Detailed information on CNT3010929


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30401200Zea maysTriticum turgidum91.7980.72971633reverse complement
CNT30140791Zea maysLolium perenne92.47100.3797.331645reverse complement
CNT30681368Zea maysTriticum urartu90.571.7197.21610reverse complement
CNT30369028Zea maysSorghum bicolor79.82100.4297.821420reverse complement

Expression of CNT3010929

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MDFSRRRGRRTAPVAAIRTLHRTIQSVGATGGVYKGQGRSQRELMTRAY*

>peptide 2 (50 aa)
MMLSHANVSRAMACFEHSNFFKVTAPEARPGQLRPGAHRRQKGRAGRFSP*

>peptide 3 (44 aa)
MRPSRKSGFVARISSRITTVIRVAHTIKQTITDLMSHSQFHSSN*

>peptide 4 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPINHYSDPEGQHNRTGIL*

>peptide 5 (31 aa)
MMKFPKITRACRPRLYTRWIHQCSARAAQNI*

>peptide 6 (31 aa)
MSGPGNALPSIPLSFSLATILPPEPKDFDFS*

>peptide 7 (43 aa)
MIRFNGLLATSGAANRPRRRDPNTSPDHSIGRSDGRCVQRAGT*

>peptide 8 (32 aa)
MKYECPRLSLLIITPIPKANTIGPESYDVIPC*

>peptide 9 (30 aa)
MMRRRHEGRAIRQVIMNHRIGRQSPRQPFI*

Sequence

>CNT3010929
CCTTGTTATGACTTCTCCTTCCTCTAAATGATAAGGTTCAATGGACTTCTCGCGACGTCGGGGGCGGCGAACCGCCCCCGTCGCCGCGATCCGAACACTT
CACCGGACCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGCATTCCTCG
TTGAAGACCAACAATTGCAATGATCTATCCCCATCATGATGAAATTTCCCAAGATTACCCGGGCCTGTCGGCCAAGGCTATATACTCGTTGGATACATCA
GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTA
ACTACGGAGGGATGGCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT
GCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTGCTATGTCTGGACCTGGTAATGCCCTTCCGTCAATTCCTTTAAGTTTCAGC
CTTGCGACCATACTCCCCCCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCAGCGGGGTCCTATTAGTAACACCCGCTGATCCCTGGTCGGCATCGT
TTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCG
TCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTATTAATCATTACTCCGATCCCGAAGGCCAACACAATAG
GACCGGAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGATGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACGGCGCCGGAGGCACGAC
CCGGCCAGTTAAGGCCAGGAGCGCATCGCCGGCAGAAGGGTCGAGCCGGTCGGTTCTCGCCGTGAGGCGGACCGGCCGGCCCGGCCCAAGGTCCAACTAC
GAGCTTTTTAACTGCAACAACTTAATATACGCTATTGGAGCTGGAATTACTGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGAT
TTAGATTGTACTCATTCCAATTACCAGACACTAACGCGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGAATGGGTAATTTGCGCGCCTG
CTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCCCTATCCTA
CCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGAAGGCCGTGCGATCCGTCAAGTTATCATGAATCATCGGATCGGCAGGCAGA
GCCCGCGTCAGCCTTTTATCTAATAAATGCGCCCCTCCCGGAAGTCAGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCACA
TACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTTCGAATTAGTTCATACTTGCACATGCATGGCTTAATCTTTGAGACAAG
CATATGACTACTGGCAGGATCAACCAGGTAGCACGTCCTCGCAGACGGGCCAGCGCCGGCCTCCGCGCGGAGGCGTCGT