Detailed information on CNT30678591


BLAST search results

BLAST vs Swiss-Prot:
sp|P22275|TBA3_MAIZE, E-value = 6e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30300679Setaria viridisTriticum aestivum79.5580.6588175forward
CNT309322Setaria viridisZea mays8065.9288.64176forward
CNT30496537Setaria viridisDigitaria exilis54.0952.6588.24119forward

Expression of CNT30678591

Peptides detected in this lncRNA

>peptide 1 (67 aa)
CVVATSKVVGCILLAADELLRVEELTVYAGAHLINHSGLKINEDCTGHILPCAGLAEEGGEGERWRL*

>peptide 2 (44 aa)
MPVRTSSITVGSRSTKIARGTYFPAPVWLKKVVKGSAGVCEDAEV

Sequence

>CNT30678591
TTGTGTAGTGGCCACGAGCAAAGTTGTTGGCTGCATCCTCCTTGCCGCTGATGAGCTGCTCAGGGTGGAAGAGCTGACGGTATATGCCGGTGCGCACCTC
ATCAATCACAGTGGGCTCAAGATCAACGAAGATTGCACGGGGCACATACTTCCCTGCGCCGGTCTGGCTGAAGAAGGTGGTGAAGGGGAGCGCTGGCGTT
TGTGAAGACGCCGAGGTGAG