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Detailed information on CNT30300679


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZRB7|TBA_WHEAT, E-value = 2e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678591Triticum aestivumSetaria viridis80.6579.5588175forward
CNT30522084Triticum aestivumSetaria italica28.5720.3391.9462forward
CNT30709004Triticum aestivumGlycine max49.3139.7885.98107forward
CNT30562914Triticum aestivumActinidia chinensis92.1765.7984.5200forward
CNT30555317Triticum aestivumOryza glaberrima58.0644.0688.1126forward
CNT30135921Triticum aestivumLolium perenne87.150.2786.24189forward
CNT30129276Triticum aestivumCorymbia citriodora81.1142.1186.93176forward
CNT30719750Triticum aestivumTriticum spelta96.7788.2488.1210forward
CNT30359416Triticum aestivumLactuca sativa88.9426.9981.87193forward
CNT30579614Triticum aestivumEchinochloa crusgalli97.2453.4286.26211forward
CNT30496537Triticum aestivumDigitaria exilis51.1549.1284.68111forward

Expression of CNT30300679

Peptides detected in this lncRNA

>peptide 1 (71 aa)
VTTGEVVGCVLLAADELLGVEELAVGAGADLVNHGGLEINEDRTGHVLAGSGLAEEGVEGVITTSDGLVTVR

Sequence

>CNT30300679
GTGACCACGGGCGAAGTTGTTGGCTGCGTCCTCCTTGCCGCTGATGAGCTGCTCGGGGTGGAAGAGCTGGCGGTAGGCGCTGGTGCGGACCTCGTCAATC
ACGGTGGGCTCGAGATCAACGAAGACCGCACGGGGCACGTACTTGCCGGCTCCGGTCTCGCTGAAGAAGGTGTTGAAGGCGTCATCACCACCTCCGATGG
TCTTGTCACCGTTCGTC