Detailed information on CNT309322


BLAST search results

BLAST vs Swiss-Prot:
sp|P33628|TBA_PICAB, E-value = 2e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678591Zea maysSetaria viridis65.928088.64176forward
CNT30493173Zea maysOlea europaea62.9240.6880.36168forward
CNT30331462Zea maysDioscorea rotundata58.0530.1685.16155forward

Expression of CNT309322

Peptides detected in this lncRNA

>peptide 1 (63 aa)
PRAKLLAASSLPLMSCSGWKSWRYVPVRTSSITVGSRSTKIARGTCFPAPVWLKKVLKRPRLA*

>peptide 2 (36 aa)
ATGEIVSGILLATDELLRVEELAVRASAHLIDHSGF*

Sequence

>CNT309322
GGCCACGGGCGAAATTGTTAGCGGCATCCTCCTTGCCACTGATGAGCTGCTCAGGGTGGAAGAGCTGGCGGTACGTGCCAGTGCGCACCTCATCGATCAC
AGTGGGTTCTAGATCAACGAAGATTGCACGGGGAACGTGCTTCCCAGCACCAGTCTGGCTGAAGAAGGTGCTGAAGAGACCGAGACTGGCGTGAAGGTCG
ATCGGTGGGCGGAATGGGGAATTGAAGATCTGTCGGGCTCGGGCGAGAGTTTGCGCCGGCGTTTGTG