Detailed information on CNT30677663


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521915Setaria viridisSetaria italica1008.8798.59283forward
CNT30361544Setaria viridisSorghum bicolor87.9926.2481.93249forward
CNT30585612Setaria viridisEchinochloa crusgalli39.9320.3685.84113forward

Expression of CNT30677663

Peptides detected in this lncRNA

>peptide 1 (46 aa)
LCYYLMHPPQVFFADPQSPPFCTYRKQVRKLSLDFRELLMLKLNCP*

Sequence

>CNT30677663
CTTTGTTATTATTTGATGCATCCACCTCAAGTGTTTTTTGCTGATCCGCAAAGCCCTCCATTTTGCACGTACCGGAAGCAGGTTCGGAAATTGTCGTTAG
ATTTTCGGGAGCTGCTGATGTTAAAACTGAATTGTCCGTAGCAGGAACCTTATTCTCAGACCTTGGGGATGAACTGGGACATTCACATTCCAGATCTTTG
TTATTAGGAGAAGATGAAGGGGAAACCTTTGATTGAGGAGAATGGTTATCTGAAGAATTTGATGCAACCGCCTCAGGTACCTT