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Detailed information on CNT30677497


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7M1L0|CB23C_PEA, E-value = 7e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522017Setaria viridisSetaria italica66.651.999.69327forward
CNT30223937Setaria viridisHordeum vulgare28.5128.492.86140forward
CNT30877Setaria viridisZea mays34.0119.6295.81167forward
CNT30116708Setaria viridisOryza nivara48.8834.7887.92240forward

Expression of CNT30677497

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MRCWRRGRRRGRRGWGCPGSPARPRRRSARRP*

Sequence

>CNT30677497
TCCCATGAGATAACTAACTGAAGATCGATCTGACAAGTGACGGTTCACTCACGAATGGTACACCGTTGCATTGATTCATCATCAGCTGACATACGCATCT
GTGCTTAGTTTACAATAATTTTACATCGTCGGGCACGTCCAGGCAGCTGCTAGCTGGTCTGGTCTGGTCTGATCTGACGAGCTCACGAGCACAAAGCAAT
ACGCTGGCGCGTGCAACTACTACACGCCTACTCACGAGCAGAGGGCACATCACTTGCCGGGGACGAAGTTGGTGGCGTACGCCCATGCGTTGTTGGCGAC
GGGGTCGGCGACGTGGTCGAAGAGGTTGGGGTTGCCCAGGTAGTCCAGCCCGCCCTCGGAGAAGATCTGCGCGCCGGCCTTGAACCACACCGCCTCGCCG
AACTTGACGCCGTTCTTGGCAAGGATCTCCGGGAACACGCACCCCAGCGCGCCGAGCATGGCCCACCGCGAGTGGATCACCTCCAGCTCGC