Detailed information on CNT30676451


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30439071Setaria viridisAegilops tauschii18.9524.8593.9883forward
CNT30217653Setaria viridisKalanchoe fedtschenkoi18.9531.892.7783forward
CNT30370572Setaria viridisOryza glumipatula13.4724.1889.8359forward

Expression of CNT30676451

Peptides detected in this lncRNA

>peptide 1 (92 aa)
MDHHGEDVLSLRNQYVSSELLADELVAVVLDEHALLGLGGLARPRVGEGHVPRVGPLVHGVEVLRRLHLRLPAGEEHDAGDGGRDAAVEELQG

>peptide 2 (34 aa)
MALRFCVASTSDCPPERNMMPGTEGGMRRWRSFRV

Sequence

>CNT30676451
AAAATACTCGATCGATCAACTTCATAATTTAATTTCTCTTATACATATAGTATAGCATTACCATGCCTCAAGCTTGCATCTCAATGGCGAGCTCGATCTT
TGCAGTAGCTAGCAGTAGTAACTAACGGCACGCACAAAGCATCGATGAGCACCATGCATGGATCATCACGGCGAAGACGTGCTTAGCTTGCGTAACCAGT
ATGTATCGTCGGAGTTGCTAGCCGATGAATTAGTAGCTGTAGTTCTTGACGAACATGCCCTCCTTGGCCTCGGCGGCCTCGCCCGCCCGCGCGTAGGAGA
AGGACACGTGCCACGGGTTGGGCCCCTGGTTCATGGCGTTGAGGTTCTGCGTCGCCTCCACCTCCGACTGCCCGCCGGAGAGGAACATGATGCCGGGGAC
GGAGGGCGGGATGCGGCGGTGGAGGAGCTTCAGGGTGT