Detailed information on CNT30217653


BLAST search results

BLAST vs Swiss-Prot:
sp|Q944G9|ALFP2_ARATH, E-value = 9e-20

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676451Kalanchoe fedtschenkoiSetaria viridis31.818.9592.7783forward
CNT30237226Kalanchoe fedtschenkoiBrassica oleracea42.1524.2885.45110forward
CNT30136123Kalanchoe fedtschenkoiLolium perenne35.6317.1690.3293forward
CNT30481517Kalanchoe fedtschenkoiChara braunii35.2530.4686.9692forward
CNT30104100Kalanchoe fedtschenkoiOryza rufipogon36.417.491.5895forward

Expression of CNT30217653

Peptides detected in this lncRNA

>peptide 1 (71 aa)
LHVPTMALSITQYIFSKGKLSACFSSSSGSAQLDDQYTYPLTNIPFLASCSAEPWRMRRTRATGWATGSSR*

Sequence

>CNT30217653
CCTCCATGTCCCAACTATGGCATTAAGCATTACACAATACATTTTTTCTAAAGGAAAGTTGTCTGCCTGCTTTTCATCATCATCAGGTTCTGCGCAGCTG
GACGATCAGTACACGTATCCCTTGACGAACATCCCCTTCTTGGCCTCGTGTTCTGCAGAGCCCTGGCGTATGAGAAGGACACGTGCCACGGGTTGGGCGA
CTGGTTCATCGCGTTGAGGTTCAGCGTCGCCTCCACCTCCGATTGCCCTCCCGACAAAAAC