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Detailed information on CNT30667964


BLAST search results

BLAST vs Swiss-Prot:
sp|P69310|UBIQ_AVESA, E-value = 3e-40

BLAST vs NONCODE:
NONSTUT000620, E-value = 2e-30

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30302847Triticum dicoccoidesTriticum aestivum7570.4396.54405forward
CNT30396439Triticum dicoccoidesTriticum turgidum59.4458.5896.57321forward
CNT30496070Triticum dicoccoidesDigitaria exilis42.4149.8992.14229forward

Expression of CNT30667964

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MGTRWSIKPDTVDLIRTRHMTNSSRSNVRAITDHHGGGAPGEGWTPSGCCSQQGSCHPRAACQRR*

>peptide 2 (53 aa)
MRRCWSGGMPSLSWILALTLSIVSDDSTSRVMVLPVNVFTKICICREEPRTGW*

Sequence

>CNT30667964
AAGATCACTGCTAGTTTTGCTAGATAAAAACTGGAAGCAATCATTCAACCGGGAGATATCAAATCAACAGTAAAATGAACAAACATATTGGTTCAAACTT
ATTGATACCAAACCATACCAGATAACTGTTTCACACATCATGGGGACTCGATGGTCCATCAAACCAGATACAGTAGACTTAATACGAACAAGACACATGA
CTAACAGCAGCAGGTCCAACGTCAGGGCAATTACTGACCACCACGGAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGG
GTCCTGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCGATTG
TGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCAGTCAATGTCTTCACAAAGATCTGCATCTGCAGAGAAGAACCCAGAACAGGATGGTAAGCCTC
AAGAAGCACAGCAAGCAAAGTAACATGATAAAAATAATAA