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Detailed information on CNT30302847


BLAST search results

BLAST vs Swiss-Prot:
sp|P69310|UBIQ_AVESA, E-value = 2e-26

BLAST vs NONCODE:
NONSTUT000620, E-value = 3e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30667964Triticum aestivumTriticum dicoccoides70.437596.54405forward

Expression of CNT30302847

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MHSQKTAIVRSLLVLLDKNWKQSFNREISNQQ*

>peptide 2 (29 aa)
MYRTCKTLVISREHWELQPIKCIHRKPLL*

>peptide 3 (33 aa)
ESIARAKTQNTTLTEGEHSSIQVEETCIELAKL*

>peptide 4 (65 aa)
MGTRWSIKPDSVDLIRTRHMTNSSRSNVRAITDHHGGGAPGEGWTPSGCCSQQGCGHPPAACQQR*

Sequence

>CNT30302847
GGAATCCATTGCACGAGCAAAGACACAAAACACTACGCTTACAGAGGGTGAACACAGCAGCATCCAAGTAGAAGAAACATGTATAGAACTTGCAAAACTC
TAGTGATTTCACGGGAACATTGGGAGCTACAGCCCATTAAATGCATTCACAGAAAACCGCTATTGTAAGATCACTGCTAGTTTTGCTAGATAAAAACTGG
AAGCAATCATTCAACCGGGAGATATCAAATCAACAGTAAAATAAACAAACATATTGGTTCAAACTTAATTCATACCAAACCATACCAGATAACTGTTTCA
CACATCATGGGGACTCGATGGTCCATCAAACCAGATTCGGTAGACTTAATACGAACAAGACACATGACTAACAGCAGCAGGTCCAACGTCAGGGCAATTA
CTGACCACCACGGAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAG
ATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAG