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Detailed information on CNT30665770


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONMTRT001605, E-value = 4e-39

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30224540Triticum dicoccoidesHordeum vulgare89.3978.2990.95851forward
CNT30241434Triticum dicoccoidesAvena sativa82.8869.8888.34789forward
CNT30139746Triticum dicoccoidesLolium perenne82.9884.485.44790forward

Expression of CNT30665770

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQRQWITSSSRFLAKVSGSADSPAVSQP*

>peptide 2 (38 aa)
MPQGRRQGQADQSCRPGRAGQRSHRAVHRQCGSPQRRP*

>peptide 3 (43 aa)
MACTKKPNMENIARRPFLISLTLSSANASGSSARPSGSKLPPG*

>peptide 4 (56 aa)
ILVIYIMVVQFRPHNGILHRKRVHTHIHTLLAGNKVGGECPCVVVDGVGEVVSEVL*

>peptide 5 (44 aa)
PRNLHHGSTIQTAQRHTSPQACAHTHTHLTCREQSWWRMPMRCC*

>peptide 6 (54 aa)
MVTRASPKRNDDGRFFTALPAKAGEESDMVVAAILIDGGSMCSPRMRSGCGDGLR

Sequence

>CNT30665770
ATCCTCGTAATTTACATCATGGTAGTACAATTCAGACCGCACAACGGCATACTTCACCGCAAGCGTGTGCACACACACATACACACCTTACTTGCCGGGA
ACAAAGTTGGTGGCGAATGCCCATGCGTTGTTGTTGACGGGGTCGGAGAGGTGGTCAGCGAGGTTCTCTAGTGGACCCTTGCCGGTGACGATGGCTTGCA
CAAAGAAACCGAACATGGAAAACATAGCGAGGCGACCGTTCTTGATCTCCTTAACCTTGAGCTCGGCGAATGCCTCAGGGTCGTCGGCAAGGCCAAGCGG
ATCAAAGCTGCCGCCCGGGTAGAGCGGGTCAACGATCTCACCGAGCGGTCCACCGGCAATGCGGTAGCCCTCAACGGCGCCCATGAGCACGACCTGACAA
GCCCAGATGGCAAGGATACTTTGTGCGTGCACAAGGCTTGGGTTGCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGATCCAGCCTTGAACCAAA
CAGCCTCGCCGAACTTCACACCATTGCGGGCGAGAAGCTCGGGGAAGACGCAACCGAGCGCGCCAAGCATGGCCCAACGGCAGTGGATCACCTCCAGCTC
GCGGTTCTTGGCGAAGGTCTCGGGGTCGGCCGACAGCCCAGCGGTGTCCCAGCCGTAGTCGCCAGGGAACTCACCAGTGAGGTAGCTCGGGGGCTCGCCA
GAAAGTGGGCCGAGGTAGAGCACGCGGTCAGAGCCGTACCACGGGCTGCCGGAGGCAACCTGCTTGGCCTTTGCCGCTGTCTTGCGCATGGTGACGCGAG
CCTCCCCGAAAAGAAACGACGATGGCAGGTTCTTCACTGCCTTGCCGGCAAAGGCTGGGGAAGAGAGTGACATGGTGGTTGCAGCCATTCTGATCGATGG
AGGTTCTATGTGTTCTCCAAGAATGAGGAGTGGGTGTGGAGATGGCTTAAGG