Detailed information on CNT30651165


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30592670Rosa chinensisMusa acuminata20.7417.5687.162forward
CNT30716603Rosa chinensisMalus domestica golden26.0911.7589.7478forward
CNT3033444Rosa chinensisTheobroma cacao23.0813.5888.4169forward

Expression of CNT30651165

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MQIVCPVMYEAAGRHRNATKADTSSGSPI

>peptide 2 (34 aa)
LKGCLPLYDLAWLSLLCNGWPKNDISYHIIMPII*

Sequence

>CNT30651165
CTAAAAGGCTGCTTGCCTTTATATGACTTGGCTTGGCTATCGCTCCTATGCAATGGTTGGCCTAAAAATGATATTTCATACCATATAATAATGCCTATTA
TTTAGTGCTAGAAGCTTCGCCATATATTCGCCTATTATTCTTGCATGAGCAAATCTCAGCATATTTCATTATGCTTGGAACTGGAAGCCATTGACAGTTA
GCCCTCCATCGATGCAAATAGTCTGCCCTGTTATGTATGAGGCTGCAGGAAGGCATAGAAATGCCACCAAGGCAGACACCTCTTCAGGCTCTCCTATAC