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Detailed information on CNT30592670


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30651165Musa acuminataRosa chinensis17.5620.7487.162forward
CNT30574570Musa acuminataVitis vinifera20.686.1410073forward

Expression of CNT30592670

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MHSTERIERAKPSLSFPLPSPYYCFRFHGLDSLE

>peptide 2 (34 aa)
RAISRPFAIAIRAARLYTAWLRYRSYVVVGLKRS*

Sequence

>CNT30592670
TAGGGCTATAAGTAGGCCGTTTGCTATTGCTATAAGGGCTGCTCGCCTTTATACGGCTTGGCTTCGCTATCGCTCCTATGTAGTGGTCGGCCTTAAAAGG
AGTTAGCCTCTAATGCCTATATTAGAATAGTGCGTTAAGCTTCGCCAGAAGCACAGAAGACTAGGGGAAGCTGTTCGTATACAAGACTCGTTCCTGACTT
ACGAGCTCGTGTAGTTAGGCCTCTACTACTTCAATAAAAGAAATAGGGCTTATGCACTCCACCGAGCGAATTGAGCGAGCGAAGCCTTCCTTGAGCTTCC
CACTTCCCTCACCCTACTATTGCTTCCGCTTCCACGGGTTAGATAGTTTGGAG