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Detailed information on CNT30716603


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30651165Malus domestica goldenRosa chinensis11.7526.0989.7478forward

Expression of CNT30716603

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MTAYAIMYTCITVSKSCSLEEQAIDGHPAVYDNSLPSNVRGCR*

>peptide 2 (28 aa)
MLPRKTPPLALQDVLKGTESLSSPISFHF

>peptide 3 (31 aa)
MMQISKTILNKKPLCNYIVLVMILSFKQTKK*

Sequence

>CNT30716603
TATTTTCATTTTGATATATTACAGGTCGAATTTGGTTAAGAAATAATTGAGTTACTAAGCTTTGAAAATTGCCCCAACGTCTGGCCAAAAGCTTCAACGG
AAGGACCAAAATCATGGATGGTGGACAATCTTAGGGACCAAACTTATGGATGATGCAAATCTCAAAGACCATTTTGAATAAAAAGCCTCTTTGTAATTAT
ATTGTCTTGGTAATGATTTTATCCTTTAAACAAACCAAAAAATAAAAAAAATAAAAAATCCAGGCTTGGAAGCTCTTCTACTAGAGTGAAACGAAATGTC
AATATACCATATGGTTGGCAATCTTTTACTTATTTAATTAGAAATTAATGTCACCTATTTTCAAATACAATTAAAGCACACCACTTTGGAATTAGATACG
AGATTTTATTTTTCCAGACCTGCAACACTGTCTCTATGACTGCATATGCAATTATGTATACATGCATAACTGTTTCCAAGTCATGCTCCTTGGAAGAGCA
AGCCATTGACGGTCACCCCGCCGTCTACGATAATAGTCTGCCCAGTAATGTAAGAGGCTGCAGGTAGGCATAGAAATGCTACCAAGGAAGACACCTCCTC
TGGCTCTCCAGGACGTCCTAAAGGGCACCGAGAGTTTATCATCTCCAATTTCTTTTCATTTCGG