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Detailed information on CNT30633730


BLAST search results

BLAST vs Swiss-Prot:
sp|P27493|CB22_TOBAC, E-value = 1e-176

BLAST vs NONCODE:
NONSTUT001352, E-value = 2e-145

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30310534Capsicum annuumCamelina sativa72.7656.1781.35665forward
CNT30429024Capsicum annuumPapaver somniferum64.5547.9382.03590forward
CNT3055180Capsicum annuumAmborella trichopoda57.8851.2183.18529forward

Expression of CNT30633730

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MEILPFPEISESDGESFTACPAKEGEERAIVAAAMVYKEESEGVTSLICQ

>peptide 2 (39 aa)
MRLAWRQSFSWRSFHFQRFLSQMVRASLPVRQKKGKKEP*

>peptide 3 (68 aa)
MNQAWVAQVVKSTLAEDLGSSLEPHSLTKLDTVTGQELGENTSKSTKHSPSAVDHLEFPVLGKGFRVC*

>peptide 4 (67 aa)
MPLDHQQDLMGRSCHRGRVGRRLHQEAHQQYGIPQRLPSRQLDKPRWPRCSVHEPSLGCPSSQVHPR*

Sequence

>CNT30633730
AAGTAAACTCACAACTACAACTTTACAAGGGCATCAAACAATGAAATTTTAATATTGTTTTACGATATTCATTTTCCGGGGACAAAGTTTGTGGCGTAGG
CCCATGCGTTGTTGTTAACTGGATCTGCAAGGTGGTCAGCAAGGTTCTCCAATGGACCCTTTCCAGTAACAATGGCTTGAACAAAGAATCCAAACATAGA
GAACATAGCAAGTCTACCGTTCTTAATCTCCTTTACCTTGAGCTCAGCAAATGCCTCTGGATCATCAGCAAGACCTAATGGGTCGAAGCTGCCACCGGGG
TAGAGTGGGTCGACGACTTCACCAAGAGGCCCACCAGCAATACGGTATCCCTCAACGGCTCCCATCAAGACAACTTGACAAGCCCAGATGGCCAAGATGC
TCTGTGCATGAACCAAGCTTGGGTTGCCCAAGTAGTCAAGTCCACCCTCGCTGAAGATCTGGGATCCAGCCTTGAACCACACAGCCTCACCAAACTGGAC
ACCGTTACGGGCCAAGAGCTCGGGGAAAACACATCCAAGAGCACCAAGCATAGCCCATCTGCAGTGGATCACCTCGAGTTCCCGGTTCTTGGCAAAGGTT
TCAGGGTCTGCTGAAAGTCCAGCGGTATCCCACCCATAGTCACCAGGGAATTCACCAGTCAAGTAGCTTGGGGGCTCACCAGAGAATGGGCCCAAGTACT
TAACACGGTCTGGACCATACCATGGGCTGCTAGATGCGGCTGGCTTGGAGGCAGTCTTTCTCATGGAGATCCTTCCATTTCCAGAGATTTCTGAGTCAGA
TGGTGAGAGCTTCACTGCCTGTCCGGCAAAAGAAGGGGAAGAAAGAGCCATAGTAGCAGCTGCCATGGTTTATAAAGAGGAAAGTGAGGGGGTTACTAGT
TTGATATGTCAAAG