Detailed information on CNT30633669


BLAST search results

BLAST vs Swiss-Prot:
sp|P07370|CB2B_SOLLC, E-value = 4e-160

BLAST vs NONCODE:
NONSTUT001352, E-value = 4e-150

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514020Capsicum annuumJuglans regia41.7436.8485.58326forward
CNT30380511Capsicum annuumManihot esculenta44.6949.5788.83349forward
CNT30173248Capsicum annuumTrifolium pratense55.0665.3584.88430forward

Expression of CNT30633669

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MDQTWVAQVVKSTLAEDLRSSLEPHSLTKLDTITGQELGEDTSKSTKHSPSAVDHLEFTVLGKGFRVC*

>peptide 2 (39 aa)
MRLAWRQSFSWRSFHFQRFLSQMVRASLPVRQKKGKKEP*

>peptide 3 (47 aa)
VSKVLQWTLSSNNGLDKESKHREHSKSTVLNLLYLELSKCLWIISKT*

>peptide 4 (49 aa)
MEILPFPEISESDGESFTACPAKEGEERAIVAAAMVYKEESEGVTSLICQ

>peptide 5 (55 aa)
SARFSNGPFPVTMAWTKNPNIENIASLPFLISFTLSSANASGSSARPNGSKLPPG*

>peptide 6 (67 aa)
MPLDHQQDLMGQSCHRDRVGRQPRQEAHQQYGIPQRLPSRQLGKPRWPRCSVHGPNLGCPSSQVHPR*

Sequence

>CNT30633669
GGTCAGCAAGGTTCTCCAATGGACCCTTTCCAGTAACAATGGCTTGGACAAAGAATCCAAACATAGAGAACATAGCAAGTCTACCGTTCTTAATCTCCTT
TACCTTGAGCTCAGCAAATGCCTCTGGATCATCAGCAAGACCTAATGGGTCAAAGCTGCCACCGGGATAGAGTGGGTCGACAACCTCGCCAAGAGGCCCA
CCAGCAATACGGTATCCCTCAACGGCTCCCATCAAGACAACTTGGCAAGCCCAGATGGCCAAGATGCTCTGTGCATGGACCAAACTTGGGTTGCCCAAGT
AGTCAAGTCCACCCTCGCTGAAGATCTGAGATCCAGCCTTGAACCACACAGCCTCACCAAACTTGACACCATTACGGGCCAAGAGCTCGGGGAAGACACA
TCCAAGAGCACCAAGCATAGCCCATCTGCAGTGGATCACCTCGAGTTCACGGTTCTTGGCAAAGGTTTCAGGGTCTGCTGAAAGTCCAGCGGTATCCCAC
CCATAGTCACCAGGGAATTCACCAGTCAAGTAGCTTGGGGGCTCACCAGAGAATGGGCCCAAGTACTTAACACGGTCTGGACCATACCATGGGCTGCTAG
ATGCGGCTGGCTTGGAGGCAGTCTTTCTCATGGAGATCCTTCCATTTCCAGAGATTTCTGAGTCAGATGGTGAGAGCTTCACTGCCTGTCCGGCAAAAGA
AGGGGAAGAAAGAGCCATAGTAGCAGCTGCCATGGTTTATAAAGAGGAAAGTGAGGGGGTTACTAGTTTGATATGTCAAAG