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Detailed information on CNT30623002


BLAST search results

BLAST vs Swiss-Prot:
sp|P92919|CB23_APIGR, E-value = 0.0

BLAST vs NONCODE:
NONBNAT007398, E-value = 5e-82

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709059Daucus carotaGlycine max45.1579.2684.35428forward
CNT3091168Daucus carotaSolanum tuberosum66.7776.5487.05633forward
CNT3055180Daucus carotaAmborella trichopoda63.0857.8981.44598forward

Expression of CNT30623002

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MAWTKNPNIENMASLPFLSSFTLSSANASGSSARPNGSKLPPG*

>peptide 2 (39 aa)
METLPFPKSSDEDGAICTAFPAKEGEERAIAEAAIAQMS*

>peptide 3 (38 aa)
MLQGLPQGLMGRSFLRGKAGQQSHLVALLQHGSPPQHP*

Sequence

>CNT30623002
GAAGTCCTTAGTTTAGTACTAGTAGTGACAAAATGACATAAAATTTGGCATTCAGTAGAATTTAATTGCTTGTATTTACATAATCCAGCTCTCTCATAAT
GATTTAGAAACTAAAAATTGCACTTCTCATTTTCCGGGAACAAAGTTGGTGGCGAATGCCCAGGCATTGTTGTTAACTGGATCAGCAAGGTGGTCAGCAA
GGTTCTCCAATGGACCCTTTCCAGTCACAATGGCCTGGACAAAGAACCCGAACATCGAAAACATGGCAAGTCTTCCATTCTTGAGCTCCTTCACCTTAAG
CTCAGCAAATGCTTCAGGGTCTTCCGCAAGGCCTAATGGGTCGAAGCTTCCTCCGGGGTAAAGCGGGTCAACAATCTCACCTAGTGGCCCTCCTGCAACA
CGGTAGCCCTCCACAGCACCCATGAGAATTACCTGGGTAGCCCAGATGGCCAAGATGCTCTGTGCATGGACCAAGCTCGGGTTGCCCAAGTAGTCAAGCC
CTCCCTCACTGAAAATCTGTGAGCCAGCCTTGAACCACACAGCTTCCCCAAACTTGACACCATTTCGGGCCAAGAGCTCGGGGAAAACACATCCAAGGGC
TCCAAGCATAGCCCATCTGGAGTGAATGACTTCAAGCTCACGATTCTTGGCGAAGGTCTCGGGATCAGCAGAGAGTCCAGCTGTGTCCCAGCCATAGTCA
CCAGGGAATTCACCAGTCAGGTAAGATGGCGCTTCACCAGAGAATGGGCCCAAGTACTTGACTCTGTCTGGGCCGTACCAGGGGCTGTCGGAGACTGGTG
CTTTAACTGTCTTCCTCATGGAAACTCTTCCATTCCCAAAGAGCTCAGATGAAGATGGAGCTATTTGCACAGCCTTCCCTGCAAAAGAAGGAGAAGAGAG
GGCCATTGCTGAAGCAGCCATTGCACAAATGAGTTAAAATAGTACTAC