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Detailed information on CNT3061912


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376051Arabidopsis lyrataArabidopsis thaliana10039.1994.98319forward
CNT30727223Arabidopsis lyrataCorchorus capsularis26.025.9284.3483forward
CNT30382128Arabidopsis lyrataManihot esculenta20.0616.4187.564forward

Expression of CNT3061912

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLPPMARPSVTAGLRCPPEMLAAMETPTKR

Sequence

>CNT3061912
GATGAAACCGATAGCAATCGGAGCGATGGTTCCAAGTGATCCTTTCTTTGGATCAGCCGCTGTGGCGTAGACTGTGTACACCAGAGCAAAGGTCACCACA
ATCTCCATAACTACTCCTTCAATAGCTCCTAAACCGGCTGCAACTCCATGAGTCGACGAGGAGGAGACAAGCGACGATGGAGCCAAGGCATTGAGCAATC
CAGTAGAAGAAACCGGTTATTACTGTGATGTTGCCACCGATGGCGAGGCCGAGTGTCACGGCGGGGTTAAGGTGTCCACCGGAGATGTTGGCGGCTATGG
AAACACCGACAAAAAGGGC