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Detailed information on CNT30599582


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692294Fraxinus excelsiorOryza sativa17.7420.0592.580forward
CNT3067939Fraxinus excelsiorLeersia perrieri14.6322.9295.4566reverse complement
CNT30652446Fraxinus excelsiorRosa chinensis17.0724.9296.177forward
CNT30207452Fraxinus excelsiorHelianthus annuus13.7522.2298.3962forward

Expression of CNT30599582

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MFYYFGTFWHCTSIPGIQSKEFYDFERYIIST*

Sequence

>CNT30599582
ACGTTAACACACATCTTCCTCAATTTCTCTGTCGTCTAGGGATCAAAGAGGAGGCTGAGTTTTATCAATCTCCCTAATCATGAGAGCAAAGTGGAAGAAG
AAGAGGATGAGGAGGTTGAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCTAAGTAGTCCAGTCCCTGAATTTCCGAGCCTCCATGACTCTGGACCCTTT
TTAGGCTTTCTTATTTCCGGACTATTTAATTTCGCTAATTTCAATATGTTTTACTACTTTGGTACATTTTGGCACTGCACTTCTATTCCTGGTATCCAAT
CCAAGGAGTTCTATGATTTTGAACGTTACATTATTTCAACTTAATTTGCTATATCAATGTGGTTCTCCAGCTTTACCTTTTTATTGTGATTATTAGATAT
CATTTACATGCCTGCAGAGTATAATTTGGTTTTATGATGAATGAATATGAG