Detailed information on CNT30591741


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76I22|LOX1_ORYSJ, E-value = 1e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692296Musa acuminataOryza sativa25.5516.2481.89127forward
CNT3020541Musa acuminataCitrullus lanatus21.3343.0986.79106forward
CNT308024Musa acuminataZea mays18.3137.4584.6291forward
CNT30344056Musa acuminataEragrostis tef57.7530.8980.84287forward
CNT30326237Musa acuminataAsparagus officinalis27.976.2681.29139forward

Expression of CNT30591741

Peptides detected in this lncRNA

>peptide 1 (34 aa)
LERLERAAVRGPLRRVPLPKVHLVGGVARQDLDE*

>peptide 2 (32 aa)
RTPRARCGPWSTPASPFAQGTPRRRSGATGPR*

>peptide 3 (80 aa)
SNASSALRSVVHSGESLCPRYTSSEEWRDRTSMSDTPRMVWNWLVMVFRNARSGFFSSSWYSGVPGSGMNRRLMVGRLGR*

Sequence

>CNT30591741
CTCGAACGCCTCGAGCGCGCTGCGGTCCGTGGTCCACTCCGGCGAGTCCCTTTGCCCAAGGTACACCTCGTCGGAGGAGTGGCGCGACAGGACCTCGATG
AGTGACACGCCGAGGATGGTCTGGAACTGGCTGGTGATGGTCTTCAGGAACGCTAGGTCCGGGTTCTTCTCCAGCTCGTGGTACTCCGGCGTGCCCGGCT
CGGGCATGAACCGCCGACTGATGGTGGGCCGGTTGGGGAGGTAGCCAGCGTAGGGGTACTGCCCGAAGTTGACCGCCGCGTGCAGGGCGGAGGCCACCCA
GATGATGGTGGTACAGGCCTGCAGCTCGACATCGGCCCGGATCGCCGCGTCGTTGCTGTAGTAGATGGAGCAGTACTCGGTGACCCAAGTCTCGATCGCA
GACCAGATTGCCAGGCCGTCGACGGCGAAGGGGTAGTCCTTGATCAGTAGGCGGAGCTTGTTCGGGCTCGCCGGGTCTTCCACCGCAACTCCTCTGC