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Detailed information on CNT30713171


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30567016Malus domestica goldenActinidia chinensis25.939.1483.5291forward

Expression of CNT30713171

Peptides detected in this lncRNA

>peptide 1 (88 aa)
CPSIRRHCHCVPHRWINKVELFGISLGIEISKTLSKDVKIVSVKMDRMVFCVTMLVSCSTTCTLDPYFNLYPLVPDIGCQRERLTLPV*

>peptide 2 (37 aa)
AHPFAGTATVFLIGGSTRLNFLVSVWALKFPKPSARM*

Sequence

>CNT30713171
CTGCCCATCCATTCGCAGGCACTGCCACTGTGTTCCTCATAGGTGGATCAACAAGGTTGAACTTTTTGGTATCAGTCTGGGCATTGAAATTTCCAAAACC
CTCAGCAAGGATGTAAAAATCGTATCCGTGAAGATGGATAGGATGGTTTTCTGTGTGACGATGCTTGTGTCCTGCAGCACAACCTGCACCCTTGATCCAT
ACTTCAACTTGTATCCTCTAGTGCCTGACATTGGTTGCCAAAGAGAGCGACTCACATTGCCAGTGTAGTCGAATTTCGTCGGAGGGTTTGCTGGAAAATC
TGCAGTGAAAACTCCAGGGATGTTTTGTAGGTATGCCTGAAGGATTGAAAT