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Detailed information on CNT30565328


BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 3e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30488043Actinidia chinensisOlea europaea23.7620.9887.2186forward
CNT30712109Actinidia chinensisGlycine max30.3920.9983.64110forward
CNT30639107Actinidia chinensisCapsicum annuum27.0723.4483.6798forward
CNT3095914Actinidia chinensisSolanum tuberosum27.0715.1283.6798forward
CNT30152734Actinidia chinensisPrunus persica27.913.9385.15101forward
CNT30707083Actinidia chinensisPrunus avium48.3421.7783.43175forward
CNT30334721Actinidia chinensisCynara cardunculus69.3435.7578.88251forward

Expression of CNT30565328

Peptides detected in this lncRNA

>peptide 1 (84 aa)
ETLINFLLSTLEATWDTLPTIVEKKAQGNGNIEVNAQDIGLNGSTKAKGSFKISKPLNERATRGLWRGPNHNVDQTIEQIGTNT*

>peptide 2 (80 aa)
MGTLRLMPKTLALMAVQRQRAASRSASPSMREQQGVFGGVPTTMLTKPLSKLAQTPSFRVSLGQVALVEREEEGCGCNSL*

Sequence

>CNT30565328
GGAAACATTAATCAATTTTTTATTAAGCACATTGGAAGCCACTTGGGACACTCTTCCCACAATAGTTGAGAAGAAGGCTCAAGGAAATGGGAACATTGAG
GTTAATGCCCAAGACATTGGCCTTAATGGCAGTACAAAGGCAAAGGGCAGCTTCAAGATCAGCAAGCCCCTCAATGAGAGAGCAACAAGGGGTCTTTGGA
GGGGTCCCAACCACAATGTTGACCAAACCATTGAGCAAATTGGCACAAACACCTAGTTTTAGGGTGTCTTTAGGGCAAGTGGCCTTGGTTGAAAGAGAGG
AGGAGGGTTGTGGATGCAATAGCCTTTGAAGCCATCTCAAAAGATGCAAGTTTGTTTGCGGT