Detailed information on CNT30488043


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548039Olea europaeaIpomoea triloba24.8823.6786.27102forward
CNT30712211Olea europaeaGlycine max24.6315.6383.17101forward
CNT30639107Olea europaeaCapsicum annuum28.0527.5184.35115forward
CNT3095914Olea europaeaSolanum tuberosum23.1714.6688.4295forward
CNT30565328Olea europaeaActinidia chinensis20.9823.7687.2186forward
CNT30152734Olea europaeaPrunus persica20.4911.5989.2984forward
CNT30334721Olea europaeaCynara cardunculus27.0715.8187.39111forward

Expression of CNT30488043

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MPKTFALMAVQRQTAASRSASPLMSVQQGVFECL*

Sequence

>CNT30488043
TCCACAGTAGTTAAGCAACAAACTGAGGGAAACTGGGACATTTAGGTTAATGCCCAAAACATTTGCTTTAATGGCAGTGCAAAGGCAAACAGCAGCCTCA
AGGTCAGCAAGCCCTTTAATGAGTGTGCAGCAGGGAGTTTTTGAGTGTCTTTAGGGCACTTGCCCTTCGATGGGTGGTGCTTGTGACCGTGGCCGTGGCT
GGGGGTGAGGGTGGGGGTGGTGGGTGTCGTTGGTGTTGGTGTTGGTGTTGGAGTTGTTGGTGGTGTTGGAGGGCATGGGACAGAATTGGAAGTGACTAAT
GTGAAGAAGAGTAGGTTGAGAAGAAGGAGAAGGGTAGGTTTCGAAGCCATTGATTTTGAAGATACTTGAAAATTTTGTTTTGTTAATGCAAGAGAGTTTA
TATTTTCGGC