CANTATAdb - search

Detailed information on CNT30707083

BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SU35|ERLL1_ARATH, E-value = 1e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30712109	Prunus avium	Glycine max	17.66	27.1	82.39	142	forward
CNT30565328	Prunus avium	Actinidia chinensis	20.77	46.13	82.63	167	forward
CNT30152734	Prunus avium	Prunus persica	45.52	50.48	89.89	366	forward
CNT3039001	Prunus avium	Cucumis melo	15.3	25.73	84.55	123	forward
CNT30334721	Prunus avium	Cynara cardunculus	30.97	35.47	78.71	249	forward

Expression of CNT30707083

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MSIAWREHCTYISYISKETCLMYYSQRLMACLLLKQSCRKGSSR*

>peptide 2 (97 aa)
MPKTLALMAVQRHTAASTSARPAMRLQQGVFDGVPTTRCTKSFNKLAHTPSLRVSLGQEGLGGLGLGVGVEGGGCFGDFGGGGQLGGGFGGGGQLGK*

Sequence

>CNT30707083
ACTAATTATCATGATAGTCGCATTTAACTTTAATTGTCTAAAATCAATAACAAAAACCACCAATGCTCAAAGACTGAAAAGATAAGAAGTAGCAAAGTTT
TCAATTCAAAGGGAAACATATATGAGCATTGCTTGGAGAGAACATTGTACATATATCAGTTACATTTCGAAGGAAACATGCCTAATGTATTACAGCCAAA
GATTAATGGCCTGTCTTTTATTGAAACAAAGCTGTCGAAAGGGCAGCAGTAGGTGAGAAGGTCATGGCACCACTAGGCGCATTGGAAGTCTGTTGGGACA
GACTTGCCACAGTAATTCAAAAGCAAGCTTAAGGAGACTGGCACATTAAGATTGATGCCCAAAACGTTGGCCTTAATGGCAGTGCAAAGGCACACAGCAG
CATCAACATCAGCAAGACCCGCAATGAGGCTACAGCAAGGGGTCTTTGATGGGGTCCCCACAACAAGGTGCACCAAATCATTCAACAAATTGGCACATAC
CCCTAGCTTAAGGGTGTCTTTAGGGCAAGAGGGTTTAGGAGGGTTGGGGCTTGGGGTTGGGGTTGAGGGAGGAGGGTGTTTTGGGGATTTTGGTGGTGGT
GGACAATTAGGTGGGGGTTTTGGTGGTGGTGGACAATTAGGTAAATGATGATTTGAACTCACTGAAGTGAAAAATACAAAGTTAAGGGAGAGAAGAAGAG
CAATTGTAAATACATTATGAGAAGCCATTTTAGAACTAAATTCCCTCAGGCAGTGAAATGACTGATTGATATTCTTGGGTTAACTTGTAGATGGATTTTT
AGGT