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Detailed information on CNT30565108


BLAST search results

BLAST vs Swiss-Prot:
sp|P28377|RBL_ACTCH, E-value = 2e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019929Actinidia chinensisCitrullus lanatus49.2793.0991.83404forward
CNT30598584Actinidia chinensisFraxinus excelsior39.3961.5286.38323forward
CNT30360303Actinidia chinensisLactuca sativa50.1279.1991.97411forward

Expression of CNT30565108

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MVFDSPNTSLLYTLSYIWRNPILIFTPPFFESKYRNNLKNKKFPLDSGICCICKS*

Sequence

>CNT30565108
TGTTAGTAATAGAACCTTCTTCAAAAAGGTCTAAAGGATAAGCTACATAAGCAATAAATTGAGTTTCTTCTCCAGCAACGGGCTCTATGTGGTAGCATCG
CCCTTTGTAACGATCAAGGCTAGTAAGTCCATCGGTCCACACAGTTGTCCATGTACCAGTAGAAGATTCCGCAGCTACCGCGGCCCCCGCTTCTTCGGGT
GGAACTCCAGCAACGGGCTCTATGTGGTAGCATCGCCCTTTGTAACGATCAAGGCTAGTAAGTCCATCGGTCCACACAGTTGTCCATGTACCAGTAGAAG
ATTCCGCAGCTACCGCGGCCCCCGCTTCTTCGGGTGGAACTCCAGGCTGAGGAGTTACTCGGAATGCTGCCAAGATATCAGTATCTTTGGTTTCATAGTC
AGGAGTATAATAAGTCAATTTGTAATCTTTAACACCAGCTTTGAATCCAACACTTGCTTTAGTCTCTGTTTGTGGTGACATAAATCCCTCCCTACAACTC
ATTAATTAAGAATTCTCACAACAACAAGGTCTACTCGACATGAATTACGCGTTAATGAAACTTTTCACAGGAATCTTTCACAAAATTCTTAACTAATATT
ATCAACTAATCAGAGCAGAGTGCTTTCTTATTAGACCATGGTATTTGATTCGCCAAATACATCATTATTGTATACTCTTTCATATATATGGCGCAACCCA
ATTCTTATTTTTACCCCCCCTTTTTTTGAATCGAAATACCGAAATAACCTAAAGAATAAGAAATTCCCTCTTGACAGTGGTATATGTTGTATATGTAAAT
CCTAGATGTGAAAATATGCG