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Detailed information on CNT30598584


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019929Fraxinus excelsiorCitrullus lanatus38.864788.24204forward
CNT30565108Fraxinus excelsiorActinidia chinensis38.8624.8888.24204forward
CNT30217626Fraxinus excelsiorKalanchoe fedtschenkoi23.0518.8883.47121forward
CNT30360303Fraxinus excelsiorLactuca sativa28.9529.2994.74152forward
CNT30434475Fraxinus excelsiorPapaver somniferum26.6736.4686.43140forward

Expression of CNT30598584

Peptides detected in this lncRNA

>peptide 1 (42 aa)
HELRILTTTRSTRHELGVNETFHRNLSQTSQLILILSTNQNV*

Sequence

>CNT30598584
CATGAATTAAGAATTCTGACAACAACAAGGTCTACTCGACACGAATTAGGCGTTAATGAAACTTTTCACAGGAATCTTTCACAAACTTCCCAACTAATAC
TAATATTATCAACTAATCAGAATGTTTGATTATTAGACCATGGTATTTGATTTACCAAATACATCATTATTGTATACTCTTTCATATATATAGCGCAACC
CAATTTTTTTTTTACCTTTTTTGGAATCGAAATACCTAACTAATAAGAAATTCCCTCTTGACAGTGATATATGTTGTATATGTAAATCCTAGATGTGAAA
ATATGCGGAATTCGTCTATGAAAGGGTATAAAAAAACGAAAAGAAAAAATATAGGCTAGGCGTAAGCGTAAATTGATATGCTGAAATAAAAAATACGAAG
AACCAATGATATAGAAATAATGAATCCTAATGTAAATAGAGTTCAGGTTCGAATTCGATAGACTATTTTCTATAATATAGATGGGATTGTCTATCATTAT
AGACAAATGAAAAACTTTCTCAAGA