Detailed information on CNT30554452


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30132520Oryza glaberrimaLolium perenne46.1910.6793.8197forward
CNT3013829Oryza glaberrimaZea mays25.717.8996.354forward
CNT30362245Oryza glaberrimaSorghum bicolor43.8134.7294.5792forward
CNT30109025Oryza glaberrimaOryza longistaminata93.8123.5198.98197forward
CNT30577030Oryza glaberrimaOryza barthii72.3823.79100152forward
CNT30580727Oryza glaberrimaEchinochloa crusgalli42.389.4493.2689forward

Expression of CNT30554452

Peptides detected in this lncRNA

>peptide 1 (69 aa)
PHLNVHNDTSIQELCHVLPEALHVVSIHLSQPQTREECGGGACLSAKTWMAVLPWKRGWSSTPRVRYSMF

Sequence

>CNT30554452
CCCCACCTCAATGTCCACAATGACACCAGCATCCAAGAACTCTGCCATGTTCTCCCTGAAGCTCTTCATGTAGTCAGCATACATCTGTCACAGCCACAGA
CAAGAGAAGAATGTGGTGGTGGGGCTTGCTTATCAGCTAAAACCTGGATGGCAGTTCTTCCATGGAAGAGAGGCTGGTCATCCACTCCAAGGGTGAGGTA
CTCGATGTTC