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Detailed information on CNT30543412


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3045167Brassica napusPrunus dulcis44.968.5680.58242forward
CNT30259602Brassica napusBrassica rapa100.7473.2897.24543forward
CNT30607765Brassica napusGossypium raimondii23.7519.1384.38128forward

Expression of CNT30543412

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MKIISVELEFQLLHRLLVFSKPKRVEEWSTGVSRVT*

Sequence

>CNT30543412
AAGACTGTAGGATACAAGAGAATGAGAGTCCAACATAAAACACATGGGATGATATGAAGATCATCTCAGTGGAACTTGAGTTTCAACTCCTTCATCGACT
TCTCGTCTTTTCCAAACCCAAGAGGGTTGAAGAATGGTCCACCGGGGTAAGCCGGGTCACCTGAACCCGCGAAACCTTTCTCTAGACCCAAGAAGTATTG
TTTACCCATAGATCCTGGGTTGTACCAGTCCTGCAACCTCCTGTGCTCGGCAAATCCCATCAAAGCCATCTCGAGAACAAAGAGTGTGTAAGGGTCTGCC
CAGTAGCTGTATGTCCCTGCAGGTGGAGTTGATGCAGCCTTAACAACCAAGGAAACCTTCCTCTGTGATACGGACACAGCTGGTTTTGCGCCGAATATCT
GTCTAGCGGTCTGAACAGAGGAGGTAAGTGAAGAAGATACAAGCGCTTGTGCTGCCATTTTTTTTTGCTTAAACTCTTCTCTTCTGTCACCAAGAGACGA
TGATTATTGAATAATGGTCTGCAGGGAACCTAGTGTTAA