Detailed information on CNT30539730


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377387Brassica napusArabidopsis thaliana28.513.8386.8961forward
CNT30234386Brassica napusBrassica oleracea67.7616.0691.03145forward
CNT30115586Brassica napusOryza nivara40.1915.5287.2186forward

Expression of CNT30539730

Peptides detected in this lncRNA

>peptide 1 (70 aa)
LGDLRVPRQCFLHDPAHVRDRQKPILLTRRRAASVLVAARIVVGVRHLRSNGKSEVAARERERKRECIGSV

>peptide 2 (69 aa)
LEIFAFPGNAFFMIRLTFAIGRNLSCSRDDAPPPSLWPPESLSESAISDLTVNRRSPLERERGRESVLGP

Sequence

>CNT30539730
CCTTGGAGATCTTCGCGTTCCCAGGCAATGCTTTCTTCATGATCCGGCTCACGTTCGCGATCGGCAGAAACCTATCCTGCTCACGCGACGACGCGCCGCC
TCCGTCCTTGTGGCCGCCAGAATCGTTGTCGGAGTCCGCCATCTCAGATCTAACGGTAAATCGGAGGTCGCCGCTAGAGAGAGAGAGAGGAAGAGAGAGT
GTATTGGGTCCGTT