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Detailed information on CNT30410959


BLAST search results

BLAST vs Swiss-Prot:
sp|P12062|CB26_PETSP, E-value = 1e-139

BLAST vs NONCODE:
NONSTUT002514, E-value = 2e-74

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701229Papaver somniferumQuercus lobata67.1530.7182.08597forward
CNT30374613Papaver somniferumArabidopsis thaliana37.0136.3183.28329forward
CNT30268034Papaver somniferumChenopodium quinoa15.8656.8587.94141forward
CNT3070976Papaver somniferumQuercus suber41.0671.8580.27365forward
CNT30378978Papaver somniferumManihot esculenta67.1552.0581.74597forward
CNT30561790Papaver somniferumActinidia chinensis58.8375.6980.11523forward
CNT30538907Papaver somniferumBrassica napus29.5860.7480.99263forward
CNT30238815Papaver somniferumBrassica oleracea30.9341.1180.36275forward
CNT30510148Papaver somniferumSolanum lycopersicum29.5862.0380.99263forward
CNT30311404Papaver somniferumCamelina sativa61.1982.878.86544forward
CNT30264606Papaver somniferumBrassica rapa58.4960.6877.31520forward
CNT30612591Papaver somniferumArabis alpina61.368.378.53545forward
CNT30648173Papaver somniferumRosa chinensis64.2332.8780.21571forward
CNT30625449Papaver somniferumDaucus carota32.431.382.29288forward
CNT30480205Papaver somniferumArabidopsis halleri56.1366.0979.36499forward
CNT30326027Papaver somniferumAsparagus officinalis30.9348.3383.27275forward
CNT30119392Papaver somniferumCitrus clementina41.1739.8380.6366forward
CNT30723501Papaver somniferumLupinus angustifolius38.5831.7679.59343forward

Expression of CNT30410959

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MLDWMLFTVRRMEIRPPSTLPTLRKQFDQRMQTFGLQWWP*

Sequence

>CNT30410959
AACACTGAAGATTCGATAACTGCTAATATTCAAATGTACACCCAAGGAACTTCAGAAAACTTAACAAGCCTGAAACATTGATACACCCCTAGAAAATTAC
ATTCATTTTCCAGGAGCAAAGTTAGTAGCATAAGCCCATGCATTGTTTGCAACAGGATCGGCGATGTGGTCATAAAGGTTTTCAATTGGACCCTTTCCAG
TAACAATAGCCTGAACGAAATATCCGAACATTGAGAACATAGCAAGTCTCCCATTCTTGATTTCCTTTACCTTCAATTCAGAAAAGGACTCTGGATCATC
AGCTAATCCTAGAGGGTCAGAAGATCCACCAGGGTAAAGTTTGTCTAGTCCTTCTCCAAGTGGACCACCACCGACTCTGTATCCTTCAACAAACCCCATT
AGTACAACTTGAGTAGCCCAGATTGCAAGGATGCTTTGGGCATGTACCAAGTTAGGGTTGCCAAGGTAGTCCAAACCACCTTCAGAGAAAATCTGTGAGC
CAGCTTTGAACCATACAGCTTCTCCGAAATTGATACCGTTCTTTGAAAGAACTTCAGGGAAGACGCAGCCTAAGGCACCCAACATAGCCCATCTGCAGTG
GATCACTTCGAGTTCACGGTTCTTAGCGAATGTCTCTGGGTCAGCAGATAATCCGGCTGTGTCCCAACCATAGTCACCTGGGAATTCACCAGTGAGGTGA
TTTACATGACATAAAAGGAGTTGTATAATTACCACATGCTTGATTGGATGCTTTTTACGGTACGGCGCATGGAGATACGACCACCTTCGACATTGCCAAC
TTTGCGAAAGCAGTTTGACCAGCGAATGCAGACCTTTGGATTGCAGTGGTGGCCATGATTTTTTTTGTTTCTTCTTTGTTATGTTTTTT