Detailed information on CNT30525117


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SLQ8|PSBP_CUCSA, E-value = 4e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30278100Phaseolus vulgarisChenopodium quinoa23.6714.2992.9671forward
CNT30380741Phaseolus vulgarisManihot esculenta23.6723.6785.9271forward
CNT30709854Phaseolus vulgarisGlycine max41.6717.2788125forward
CNT3088597Phaseolus vulgarisVigna radiata7380.5195.89219forward
CNT30356239Phaseolus vulgarisLactuca sativa20.6720.3387.162forward

Expression of CNT30525117

Peptides detected in this lncRNA

>peptide 1 (94 aa)
FPIGCISRRHLGANSSSTNEHSEGQPARDKGGGIRLLDNLLLCLADNVVRVGEGMVVQETLGGGHCAQSSKSSQFLWHVNHSMCGVGSGFDVGG*

>peptide 2 (60 aa)
MSTVRANRRETRVVASGSWTTCFCALQTMWLGLVRAWWCKKHWVEAIVLKAQNLHSFFGM*

Sequence

>CNT30525117
TTCCCCATAGGCTGCATCAGCAGGAGACACCTTGGAGCCAACAGCAGCAGCACCAATGAGCACAGTGAGGGCCAACCGGCGAGAGACAAGGGTGGTGGCA
TCAGGCTCTTGGACAACCTGCTTCTGTGCCTTGCAGACAATGTGGTTAGGGTTGGTGAGGGCATGGTGGTGCAAGAAACATTGGGTGGAGGCCATTGTGC
TCAAAGCTCAAAATCTTCACAGTTTCTTTGGCATGTGAATCACAGTATGTGTGGAGTTGGAAGTGGTTTTGATGTGGGAGGATGACGTGGCAGTGAAAAT